DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and cckar

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_697493.2 Gene:cckar / 569038 ZFINID:ZDB-GENE-120404-2 Length:446 Species:Danio rerio


Alignment Length:469 Identity:162/469 - (34%)
Similarity:226/469 - (48%) Gaps:92/469 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LGTSSSPSPSSTPASSSSTSTGMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLN 152
            :|..|.....|||:.|........|.:: .|::|.:.:.|||.|:|:.|::||||||:||:|||:
Zfish    25 IGNLSECKNESTPSPSEPKDMNQTVRIV-LYALIFILSFLGNSLIIAVLLRNRRMRTVTNLFLLS 88

  Fly   153 LAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPL 217
            ||:||::|.|.|||.||:..|:::||||..:||:..:....||:||:..|||||.|||.|||:||
Zfish    89 LAVSDLMLCVFCMPFTLIPNLMKDFIFGSGMCKVATYFMGISVSVSTLNLVAISLERYSAICNPL 153

  Fly   218 RSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYC---KCREFWPDQGYELFYNIL 279
            :||:|||.|||.|:|...|:...|.|.|..:.|.|:|..|....   .||..||....:.:|..|
Zfish   154 KSRAWQTKSHAVKVISATWVVSFLLMLPYPIGSTLVPFIRSNNSTGNMCRLVWPSDVMQTWYIFL 218

  Fly   280 LDFLLLVLPLLVLCVAYILITRTLYVGMA-----KDSGRILQQSLPVSATTAGGSAPNPGTSSSS 339
            |..|.|| |.:::..||.|.:..||.|:.     :.|.|..:.                ||||. 
Zfish   219 LLTLFLV-PGIIMMTAYGLTSLELYRGIRFEMTNRKSNREKEY----------------GTSSL- 265

  Fly   340 NCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSP 404
                              .||:|:|.....|..                           |.|.|
Zfish   266 ------------------KNGDSDGCYFQPSKK---------------------------KRSEP 285

  Fly   405 SIRVH-DAALRR---SNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVD 465
            .:..| .:.|||   ::....|.:||||::||.|:|..||:||||::|:|.............:.
Zfish   286 VMPSHPKSKLRRVCSNSPTANLMAKKRVIRMLLVIVGLFFLCWTPVFVVNAWRAFDRRSADSLLS 350

  Fly   466 YTAISFLQLLAYSSSCCNPITYCFMNASFR----------RAFVDTFKGLPWRRGAGASGGVG-- 518
            ...|||:.||:|:|:|.|||.|||||..||          |..||.|.....||.|..:||:|  
Zfish   351 GAPISFIHLLSYTSACVNPIVYCFMNKRFRQGILSTFSCCRGDVDEFSRSSTRRSARGAGGLGTL 415

  Fly   519 ----GAAGGGLSAS 528
                |...|....|
Zfish   416 FKGAGQTDGNTQTS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 144/407 (35%)
TM helix 1 114..138 CDD:320334 8/23 (35%)
TM helix 2 147..169 CDD:320334 13/21 (62%)
TM helix 3 185..207 CDD:320334 9/21 (43%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 8/22 (36%)
TM helix 6 429..451 CDD:320334 11/21 (52%)
TM helix 7 466..491 CDD:320334 14/24 (58%)
cckarXP_697493.2 7tmA_CCK-AR 48..383 CDD:320644 143/398 (36%)
TM helix 1 49..75 CDD:320644 9/26 (35%)
TM helix 2 82..108 CDD:320644 16/25 (64%)
TM helix 3 120..150 CDD:320644 15/29 (52%)
TM helix 4 163..184 CDD:320644 8/20 (40%)
TM helix 5 212..240 CDD:320644 10/28 (36%)
TM helix 6 308..338 CDD:320644 16/29 (55%)
TM helix 7 351..376 CDD:320644 14/24 (58%)

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