DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and LOC556532

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_684448.3 Gene:LOC556532 / 556532 -ID:- Length:366 Species:Danio rerio


Alignment Length:419 Identity:92/419 - (21%)
Similarity:156/419 - (37%) Gaps:128/419 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 GTSSSPSPSSTPASSSSTSTGMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNL 153
            |..|:......|...|:..|.:.|:||     :.:..::||.||:..:::..:|:|.||:::.||
Zfish    20 GNLSALDEVDEPLPRSAKITIVVVYLI-----VCVVGLVGNCLVMYVIIRYTKMKTATNIYIFNL 79

  Fly   154 AISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLR 218
            |::|.|: :..:|......:|..:.||..|||........::..|.:||..:|.:||.|:|||:|
Zfish    80 ALADALV-LATLPFQGTDVILGFWPFGLPLCKAVVAIDYYNMFTSVFTLTVMSVDRYIAVCHPVR 143

  Fly   219 SRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKC-------REFWPDQGYELFY 276
            |.:.:|...|..|...:|:.......|..:..|:......| .:|       |:.| |:.: :..
Zfish   144 SLTVRTPLRAKLINVAVWVLASAVGLPAMIMGQVEKDDHDG-AECMVSLPEPRKHW-DRVF-MMC 205

  Fly   277 NILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNC 341
            ..|..||   :|:|::.|.|.|:.|.|      .|.|:|..|                       
Zfish   206 VFLFSFL---IPVLIISVCYGLMVRRL------RSVRVLSGS----------------------- 238

  Fly   342 ILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSI 406
                                                                             
Zfish   239 ----------------------------------------------------------------- 238

  Fly   407 RVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVY--EYVDYTAI 469
            |..|..||            |:..|:..:|..|..||.|:.|: .::..:|.|..  ......|:
Zfish   239 REKDRNLR------------RITYMVLSVVAAFVFCWMPVQVL-ALIQALGHVELGASQSSMAAM 290

  Fly   470 SFLQLLAYSSSCCNPITYCFMNASFRRAF 498
            .|...|.|::||.||:.|.|::.:|:|.|
Zfish   291 HFCIALGYANSCLNPVLYAFLDENFKRCF 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 86/394 (22%)
TM helix 1 114..138 CDD:320334 6/23 (26%)
TM helix 2 147..169 CDD:320334 7/21 (33%)
TM helix 3 185..207 CDD:320334 4/21 (19%)
TM helix 4 230..246 CDD:320334 2/15 (13%)
TM helix 5 274..297 CDD:320334 6/22 (27%)
TM helix 6 429..451 CDD:320334 7/21 (33%)
TM helix 7 466..491 CDD:320334 10/24 (42%)
LOC556532XP_684448.3 7tm_GPCRs 38..319 CDD:475119 87/399 (22%)
TM helix 1 40..64 CDD:320220 7/28 (25%)
TM helix 2 73..94 CDD:320220 7/21 (33%)
TM helix 3 110..132 CDD:320220 4/21 (19%)
TM helix 4 155..171 CDD:320220 2/15 (13%)
TM helix 5 200..223 CDD:320220 6/26 (23%)
TM helix 6 249..271 CDD:320220 7/22 (32%)
TM helix 7 287..312 CDD:320220 10/24 (42%)

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