DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and tacr3a

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001243567.1 Gene:tacr3a / 555482 ZFINID:ZDB-GENE-090312-106 Length:399 Species:Danio rerio


Alignment Length:420 Identity:108/420 - (25%)
Similarity:170/420 - (40%) Gaps:120/420 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 ASSSSTSTG-------MPVWLIP----SYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLA 154
            :.:.|..||       .|.|.:.    :||.||..||.|||:|:..::.::||||:||.||||||
Zfish     4 SQNGSNLTGNFTNQFVQPPWRVALWSVAYSSILAIAVFGNLIVMWIILAHKRMRTVTNYFLLNLA 68

  Fly   155 ISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRS 219
            .||..:......:..|.....::.|||..||...|....||..|.:::.||:.:||.||.|||:.
Zfish    69 FSDASMAAFNTLINFVYATHGDWYFGEAYCKFHNFFPVTSVFASIYSMSAIAVDRYMAIIHPLKP 133

  Fly   220 RSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKCREFWPDQGYELF-YNILLDFL 283
            |...|.:..  ||..||:..::...|:..||.:  ...|....|...||....:.| |:|::..|
Zfish   134 RLSATATKV--IIVCIWVLAVVLAFPLCFFSTI--KKLPKRTLCYVAWPRPSEDPFMYHIIVAML 194

  Fly   284 LLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTAT 348
            :.||||:|:.:.|.::..||:                      ||..|                 
Zfish   195 VYVLPLVVMGINYTIVGLTLW----------------------GGEIP----------------- 220

  Fly   349 AVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAAL 413
               .::|:|..|.                                                    
Zfish   221 ---GDSSDNYQGQ---------------------------------------------------- 230

  Fly   414 RRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVV-YEYVDYTAISFLQLLAY 477
                    |.:|::||||:.::|:.|..||.|.:|...:..|...:. ::::....:| :..||.
Zfish   231 --------LRAKRKVVKMMIIVVVTFAFCWLPYHVYFLVTGLNKQLARWKFIQQIYLS-IMWLAM 286

  Fly   478 SSSCCNPITYCFMNASFRRAFVDTFKGLPW 507
            ||:..|||.||.:|:.||..|...|:..|:
Zfish   287 SSTMYNPIIYCCLNSRFRAGFKRVFRWCPF 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 101/391 (26%)
TM helix 1 114..138 CDD:320334 10/27 (37%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 9/23 (39%)
TM helix 6 429..451 CDD:320334 9/21 (43%)
TM helix 7 466..491 CDD:320334 10/24 (42%)
tacr3aNP_001243567.1 7tm_GPCRs 26..307 CDD:475119 100/387 (26%)
TM helix 1 28..52 CDD:320669 10/23 (43%)
TM helix 2 61..83 CDD:320669 9/21 (43%)
TM helix 3 99..121 CDD:320669 7/21 (33%)
TM helix 4 142..158 CDD:320669 4/17 (24%)
TM helix 5 185..208 CDD:320669 9/22 (41%)
TM helix 6 238..260 CDD:320669 9/21 (43%)
TM helix 7 275..300 CDD:320669 10/25 (40%)

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