DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and NPFR

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001246947.1 Gene:NPFR / 40754 FlyBaseID:FBgn0037408 Length:489 Species:Drosophila melanogaster


Alignment Length:580 Identity:145/580 - (25%)
Similarity:222/580 - (38%) Gaps:175/580 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IVSLNVAPYNGTGNGGTVSLAGNATSS----YGDDDRD-GYMDTEPSDLVTELAFSLGTSSSPSP 96
            |:|:|........:|  ..|:|.|:||    |.||... .|:|......:...|  :.||.....
  Fly     2 IISMNQTEPAQLADG--EHLSGYASSSNSVRYLDDRHPLDYLDLGTVHALNTTA--INTSDLNET 62

  Fly    97 SSTPASS-------SSTSTGMPVW---LIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLL 151
            .|.|...       |:.:...| |   ||..|.::::|..|||.||:..:::...|||..|:|:|
  Fly    63 GSRPLDPVLIDRFLSNRAVDSP-WYHMLISMYGVLIVFGALGNTLVVIAVIRKPIMRTARNLFIL 126

  Fly   152 NLAISDMLLGVLCMPVTLVGTLLRNFIFG--EFLCKLFQFSQAASVAVSSWTLVAISCERYYAIC 214
            ||||||:||.::.||:||:..|.:.:.:|  ..|||.....||..:.||:.::.||:.:||..|.
  Fly   127 NLAISDLLLCLVTMPLTLMEILSKYWPYGSCSILCKTIAMLQALCIFVSTISITAIAFDRYQVIV 191

  Fly   215 HPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCK----------CREFWPD 269
            :|.|. |.|.:. |..|:..||...:|..:|:.|:.:||.|..|...:          |.|.||.
  Fly   192 YPTRD-SLQFVG-AVTILAGIWALALLLASPLFVYKELINTDTPALLQQIGLQDTIPYCIEDWPS 254

  Fly   270 QGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPG 334
            :....:|:|....:..::|:|::.|||.                                     
  Fly   255 RNGRFYYSIFSLCVQYLVPILIVSVAYF------------------------------------- 282

  Fly   335 TSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLA 399
                          .:||:                        |.:|            .||...
  Fly   283 --------------GIYNK------------------------LKSR------------ITVVAV 297

  Fly   400 KTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMV-MLIGPVVYEY 463
            :.||        |.|:....:.:   ||...:|..:.:.|.:.|.||...|... |...||....
  Fly   298 QASS--------AQRKVERGRRM---KRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQSM 351

  Fly   464 VDYTAISFLQLLAYSSSCCNPITYCFMNASFRRAF-------VDTFKGLPW-------------R 508
            :...||  ..::..||:|.||:.|.::|.:||:.|       .||...|..             |
  Fly   352 LVRYAI--CHMIGMSSACSNPLLYGWLNDNFRKEFQELLCRCSDTNVALNGHTTGCNVQAAARRR 414

  Fly   509 RGAGA------------SGGVGGAAG--GGLSAS--QAGAGPGAYASANT-NISL---NP 548
            |..||            .|...|.||  |||:|:  ..|...|...||.| :::|   ||
  Fly   415 RKLGAELSKGELKLLGPGGAQSGTAGGEGGLAATDFMTGHHEGGLRSAITESVALTDHNP 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 100/401 (25%)
TM helix 1 114..138 CDD:320334 9/23 (39%)
TM helix 2 147..169 CDD:320334 13/21 (62%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 6/22 (27%)
TM helix 6 429..451 CDD:320334 5/21 (24%)
TM helix 7 466..491 CDD:320334 8/24 (33%)
NPFRNP_001246947.1 7tmA_NPYR-like 88..384 CDD:320331 99/397 (25%)
TM helix 1 88..114 CDD:320331 9/25 (36%)
TM helix 2 121..146 CDD:320331 15/24 (63%)
TM helix 3 161..191 CDD:320331 10/29 (34%)
TM helix 4 202..223 CDD:320331 6/21 (29%)
TM helix 5 258..287 CDD:320331 8/79 (10%)
TM helix 6 310..340 CDD:320331 8/32 (25%)
TM helix 7 352..377 CDD:320331 8/26 (31%)

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