DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKLR-17D3 and Lkr

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:523 Identity:126/523 - (24%)
Similarity:198/523 - (37%) Gaps:188/523 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEF 182
            |..|.:.||:||.|||..:...|:|||:||:::.|||.:|:::|:.|:|......||:::....|
  Fly    42 YGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCIPFQFQAALLQSWNLPWF 106

  Fly   183 LCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIA 247
            :|....|.||.||.||.:||.||:.:|:.||.:|||:|..:.:|..  |||.||:..:|...|.|
  Fly   107 MCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKFVSKF--IIGGIWMLALLFAVPFA 169

  Fly   248 VF-------------SQLIPTSRPGYCKCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILI 299
            :.             ::....:|| :|..:....||.....|.::  |:..::|..|:...||.:
  Fly   170 IAFRVEELTERFRENNETYNVTRP-FCMNKNLSDDQLQSFRYTLV--FVQYLVPFCVISFVYIQM 231

  Fly   300 TRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEG 364
            ...|:                      |..||                            ||::.
  Fly   232 AVRLW----------------------GTRAP----------------------------GNAQD 246

  Fly   365 SAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVV 429
            |                            ..:||                       |::||:|:
  Fly   247 S----------------------------RDITL-----------------------LKNKKKVI 260

  Fly   430 KMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFL----QLLAYSSSCCNPITYCFM 490
            |||.::|:.|.:||.||.:.|.:.:.|.    |..||..||.:    ..||.|:||.||..|...
  Fly   261 KMLIIVVIIFGLCWLPLQLYNILYVTIP----EINDYHFISIVWFCCDWLAMSNSCYNPFIYGIY 321

  Fly   491 NASFRRAFVDTFKGLPWR---------------------RGAGASGGVG------GAAGGGLSAS 528
            |..|:|.|...|.....:                     |...|:..:.      |.|.||::..
  Fly   322 NEKFKREFNKRFAACFCKFKTSMDAHERTFSMHTRASSIRSTYANSSMRIRSNLFGPARGGVNNG 386

  Fly   529 Q----------AGAGPGAY-ASANTNISLN--------------------PGLAMGMGTWRSRSR 562
            :          :||..|.| .|:..|.::|                    ||:.:.|..||   |
  Fly   387 KPGLHMPRVHGSGANSGIYNGSSGQNNNVNGQHHQHQSVVTFAATPGVSAPGVGVAMPPWR---R 448

  Fly   563 HEF 565
            :.|
  Fly   449 NNF 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 104/396 (26%)
TM helix 1 114..138 CDD:320334 9/19 (47%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 11/21 (52%)
TM helix 4 230..246 CDD:320334 6/15 (40%)
TM helix 5 274..297 CDD:320334 4/22 (18%)
TM helix 6 429..451 CDD:320334 9/21 (43%)
TM helix 7 466..491 CDD:320334 11/28 (39%)
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 104/396 (26%)
TM helix 1 37..63 CDD:320515 9/20 (45%)
TM helix 2 70..95 CDD:320515 9/24 (38%)
TM helix 3 108..138 CDD:320515 14/29 (48%)
TM helix 4 149..170 CDD:320515 8/22 (36%)
TM helix 5 205..234 CDD:320515 6/30 (20%)
TM helix 6 254..284 CDD:320515 13/29 (45%)
TM helix 7 297..322 CDD:320515 9/24 (38%)

Return to query results.
Submit another query.