DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKLR-17D3 and CCHa2-R

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length:613 Identity:125/613 - (20%)
Similarity:207/613 - (33%) Gaps:234/613 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YRALLDYYANAPSAAGHIVSLNVAPYNGTGNGGTVSLAGNATSSYGDDDRDGYMDTEPSDLVTEL 84
            |.:|:|        .|..::..:|..:|.|...:..|   ||....:.:::|            |
  Fly     2 YASLMD--------VGQTLAARLADSDGNGANDSGLL---ATGQGLEQEQEG------------L 43

  Fly    85 AFSLGTSSSPSPSSTPASSSSTSTGMPVWLIPS-------YSMILLFAVLGNLLVISTLVQNRRM 142
            |..:|.::|......|.        :||...|.       |::|.:..||||..::....::|.|
  Fly    44 ALDMGHNASADGGIVPY--------VPVLDRPETYIVTVLYTLIFIVGVLGNGTLVIIFFRHRSM 100

  Fly   143 RTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISC 207
            |.|.|.::|:||::|:|:.::|:||..:.....::.|...:|::.:|.:..|:.||.:||.|:|.
  Fly   101 RNIPNTYILSLALADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSG 165

  Fly   208 ERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCK--------CR 264
            |||.||.:|||....:.::....::  ||:..||...|..:||.:  .|.|.:..        |.
  Fly   166 ERYCAIVNPLRKLQTKPLTVFTAVM--IWILAILLGMPSVLFSDI--KSYPVFTATGNMTIEVCS 226

  Fly   265 EFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGS 329
            .| .|..|..|.......:..:|||.::...||::.:.|::                       |
  Fly   227 PF-RDPEYAKFMVAGKALVYYLLPLSIIGALYIMMAKRLHM-----------------------S 267

  Fly   330 APN-PGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTT 393
            |.| ||...|                                                       
  Fly   268 ARNMPGEQQS------------------------------------------------------- 277

  Fly   394 TTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGP 458
                :...:....|:|                  |.:|:...|:.||||:.|.:|........ |
  Fly   278 ----MQSRTQARARLH------------------VARMVVAFVVVFFICFFPYHVFELWYHFY-P 319

  Fly   459 VVYEYVDYTAISFLQLL-------AYSSSCCNPIT-YCFMNASFRRAF----------------- 498
            ...|..|    .|..:|       ::.:||.||:. || ::..||:.|                 
  Fly   320 TAEEDFD----EFWNVLRIVGFCTSFLNSCVNPVALYC-VSGVFRQHFNRYLCCICVKRQPHLRQ 379

  Fly   499 -------VDTFKGLPWRRG----------------------AGASGGVGG--------------- 519
                   :|....:..||.                      .||.|||||               
  Fly   380 HSTATGMMDNTSVMSMRRSTYVGGTAGNLRASLHRNSNHGVGGAGGGVGGGVGSGRVGSFHRQDS 444

  Fly   520 -------AAGGGLSASQAGAGPGAYASA 540
                   |.|||.....:|.|.|...:|
  Fly   445 MPLQHGNAHGGGAGGGSSGLGAGGRTAA 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 89/409 (22%)
TM helix 1 114..138 CDD:320334 7/30 (23%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 4/22 (18%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 8/32 (25%)
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 87/402 (22%)
TM helix 1 71..97 CDD:320593 6/25 (24%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 13/29 (45%)
TM helix 4 182..202 CDD:320593 4/21 (19%)
TM helix 5 234..259 CDD:320593 5/24 (21%)
TM helix 6 285..315 CDD:320593 11/47 (23%)
TM helix 7 330..355 CDD:320593 7/25 (28%)

Return to query results.
Submit another query.