DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and AkhR

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster


Alignment Length:392 Identity:87/392 - (22%)
Similarity:148/392 - (37%) Gaps:125/392 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 IPSYSMILLFAVLGNLLVISTLVQNRRMR--TITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNF 177
            |..||::.:.:.:||..|: .|:..||:|  ...::.|::|||:|:::.:|.||:.:|......:
  Fly    42 ITVYSILFVISTIGNSTVL-YLLTKRRLRGPLRIDIMLMHLAIADLMVTLLLMPMEIVWAWTVQW 105

  Fly   178 IFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILC 242
            :..:.:|:|..|.:...:.:||:.:|.||.:||:||..||: ||:   :....::...|||.::|
  Fly   106 LSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRYFAILKPLK-RSY---NRGRIMLACAWLGSVVC 166

  Fly   243 MTPIAVFSQLIPTSRP---GYCKC---REFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITR 301
            ..|.|....|  ...|   ||.:|   ..|..|.. |..|.......:...||::....|    .
  Fly   167 SIPQAFLFHL--EEHPAVTGYFQCVIFNSFRSDFD-EKLYQAASMCSMYAFPLIMFIYCY----G 224

  Fly   302 TLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSA 366
            .:|:.:.:.|.|:|:.                                                 
  Fly   225 AIYLEIYRKSQRVLKD------------------------------------------------- 240

  Fly   367 GGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKM 431
                                                     |.....||||:.....:|||.:||
  Fly   241 -----------------------------------------VIAERFRRSNDDVLSRAKKRTLKM 264

  Fly   432 LFVLVLEFFICWTPLYVINTMVML-------IGPVVYEYVDYTAISFLQLLAYSSSCCNPITYCF 489
            ...:|:.|.|||||.|.|:....|       |.|::.:        .|.:.|.::||.||:.|..
  Fly   265 TITIVIVFIICWTPYYTISMWYWLDKHSAGKINPLLRK--------ALFIFASTNSCMNPLVYGL 321

  Fly   490 MN 491
            .|
  Fly   322 YN 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 87/392 (22%)
TM helix 1 114..138 CDD:320334 7/22 (32%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 6/21 (29%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 3/22 (14%)
TM helix 6 429..451 CDD:320334 11/21 (52%)
TM helix 7 466..491 CDD:320334 7/24 (29%)
AkhRNP_995639.1 7tmA_AKHR 39..328 CDD:320504 87/392 (22%)
TM helix 1 40..66 CDD:320504 7/24 (29%)
TM helix 2 74..101 CDD:320504 9/26 (35%)
TM helix 3 112..142 CDD:320504 11/29 (38%)
TM helix 4 151..172 CDD:320504 5/20 (25%)
TM helix 5 200..229 CDD:320504 6/32 (19%)
TM helix 6 256..286 CDD:320504 14/29 (48%)
TM helix 7 298..323 CDD:320504 8/32 (25%)

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