DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Npy1r

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001106828.1 Gene:Npy1r / 29358 RGDID:3198 Length:382 Species:Rattus norvegicus


Alignment Length:401 Identity:97/401 - (24%)
Similarity:158/401 - (39%) Gaps:138/401 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGE 181
            :|..:::..|.|||.:|..:::.:.||.:||:.::||:.||:|:.|:|:|.|.|.||:.:::|||
  Rat    45 AYGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAVMCLPFTFVYTLMDHWVFGE 109

  Fly   182 FLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTIS-HAYKIIGFIWLGGILCMTP 245
            .:|||..|.|..|:.||.::||.|:.||:..|.:|   |.|:..: |||..|..||:..:....|
  Rat   110 TMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINP---RGWRPNNRHAYIGITVIWVLAVASSLP 171

  Fly   246 IAVFSQLIPTSRP-----------GYCKCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILI 299
            ..::.  |.|..|           .|. |.:.:|...:.|.|..||..|....||..:.:.|..|
  Rat   172 FVIYQ--ILTDEPFQNVSLAAFKDKYV-CFDKFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKI 233

  Fly   300 TRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEG 364
                                                                             
  Rat   234 ----------------------------------------------------------------- 233

  Fly   365 SAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVV 429
                                          .|.|.:.::...::.|:..|.|       ..||:.
  Rat   234 ------------------------------YVRLKRRNNMMDKIRDSKYRSS-------ETKRIN 261

  Fly   430 KMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAIS-------FL--QLLAYSSSCCNPI 485
            .||..:|:.|.:||.||.:.||        |::: ::..|:       ||  .|.|..|:|.|||
  Rat   262 VMLLSIVVAFAVCWLPLTIFNT--------VFDW-NHQIIATCNHNLLFLLCHLTAMISTCVNPI 317

  Fly   486 TYCFMNASFRR 496
            .|.|:|.:|:|
  Rat   318 FYGFLNKNFQR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 97/401 (24%)
TM helix 1 114..138 CDD:320334 6/20 (30%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 10/21 (48%)
TM helix 4 230..246 CDD:320334 3/15 (20%)
TM helix 5 274..297 CDD:320334 7/22 (32%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 12/33 (36%)
Npy1rNP_001106828.1 7tmA_NPY1R 40..330 CDD:320517 97/401 (24%)
TM helix 1 41..67 CDD:320517 6/21 (29%)
TM helix 2 74..99 CDD:320517 11/24 (46%)
TM helix 3 112..142 CDD:320517 13/29 (45%)
TM helix 4 153..174 CDD:320517 7/20 (35%)
TM helix 5 207..236 CDD:320517 9/123 (7%)
TM helix 6 255..285 CDD:320517 13/44 (30%)
TM helix 7 298..323 CDD:320517 11/24 (46%)

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