DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Oprk1

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_038965287.1 Gene:Oprk1 / 29335 RGDID:69426 Length:431 Species:Rattus norvegicus


Alignment Length:454 Identity:102/454 - (22%)
Similarity:171/454 - (37%) Gaps:150/454 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EPSDLVTELAFSLGTSSSPSPSSTPASSSST-------------STGMPVWLIPSYSMILLFAVL 127
            ||.......|..|..|||..|:...:.|:.:             |..:||.:...||::.:..::
  Rat    62 EPGPTCAPSACLLPNSSSWFPNWAESDSNGSVGSEDQQLEPAHISPAIPVIITAVYSVVFVVGLV 126

  Fly   128 GNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQA 192
            ||.||:..:::..:|:|.||:::.|||::|.|: ...||......|:.::.||:.|||:......
  Rat   127 GNSLVMFVIIRYTKMKTATNIYIFNLALADALV-TTTMPFQSAVYLMNSWPFGDVLCKIVISIDY 190

  Fly   193 ASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGF-IW------------LGGILCMT 244
            .::..|.:||..:|.:||.|:|||:::..::|...| |||.. ||            |||.....
  Rat   191 YNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKA-KIINICIWLLASSVGISAIVLGGTKVRE 254

  Fly   245 PIAVFSQLIPTSRPGYCKCREFWPDQGY---ELFYNILLDFLLLVLPLLVLCVAYILITRTLYVG 306
            .:.|.            :|...:||..|   :||..|.:.....|:|:|::.|.|.|:...|   
  Rat   255 DVDVI------------ECSLQFPDDEYSWWDLFMKICVFVFAFVIPVLIIIVCYTLMILRL--- 304

  Fly   307 MAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGST 371
               .|.|:|..|                                                     
  Rat   305 ---KSVRLLSGS----------------------------------------------------- 313

  Fly   372 NMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLV 436
                                               |..|..||            |:.|::.|:|
  Rat   314 -----------------------------------REKDRNLR------------RITKLVLVVV 331

  Fly   437 LEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQLLAYSSSCCNPITYCFMNASFRRAFVD 500
            ..|.|||||:::. .:|..:|...:.....::..|...|.|::|..||:.|.|::.:|:|.|.|
  Rat   332 AVFIICWTPIHIF-ILVEALGSTSHSTAVLSSYYFCIALGYTNSSLNPVLYAFLDENFKRCFRD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 89/401 (22%)
TM helix 1 114..138 CDD:320334 6/23 (26%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 4/21 (19%)
TM helix 4 230..246 CDD:320334 8/28 (29%)
TM helix 5 274..297 CDD:320334 7/22 (32%)
TM helix 6 429..451 CDD:320334 9/21 (43%)
TM helix 7 466..491 CDD:320334 8/24 (33%)
Oprk1XP_038965287.1 7tmA_Kappa_opioid_R 111..392 CDD:320219 89/401 (22%)
TM helix 1 112..138 CDD:320219 6/25 (24%)
TM helix 2 145..171 CDD:320219 9/26 (35%)
TM helix 3 182..212 CDD:320219 9/29 (31%)
TM helix 4 224..246 CDD:320219 6/22 (27%)
TM helix 5 274..303 CDD:320219 9/28 (32%)
TM helix 6 318..348 CDD:320219 12/42 (29%)
TM helix 7 360..385 CDD:320219 8/24 (33%)

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