DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Oprl1

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001305876.1 Gene:Oprl1 / 29256 RGDID:68438 Length:396 Species:Rattus norvegicus


Alignment Length:403 Identity:89/403 - (22%)
Similarity:156/403 - (38%) Gaps:134/403 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 GMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTL 173
            |:.|.::..|..:.:..:|||.||:..::::.:|:|.||:::.|||::|.|: :|.:|......|
  Rat    46 GLKVTIVGLYLAVCIGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDIL 109

  Fly   174 LRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLG 238
            |..:.||..|||........::..|::||.|:|.:||.|||||:|:...:|.|.|..:...||..
  Rat   110 LGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWAL 174

  Fly   239 GILCMTPIAVFSQ----------LIPTSRPGYCKCREFWPDQGYELFYNILLDFLLLVLPLLVLC 293
            ..:...|:|:...          |:....|     :::|..     .:.|.:.....::|:|::.
  Rat   175 ASVVGVPVAIMGSAQVEDEEIECLVEIPAP-----QDYWGP-----VFAICIFLFSFIIPVLIIS 229

  Fly   294 VAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNN 358
            |.|.|:.|.|. |:     |:|..|                                        
  Rat   230 VCYSLMIRRLR-GV-----RLLSGS---------------------------------------- 248

  Fly   359 NGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLE 423
                                                            |..|..||         
  Rat   249 ------------------------------------------------REKDRNLR--------- 256

  Fly   424 SKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQL---LAYSSSCCNPI 485
               |:.:::.|:|..|..||||:.|.    :|:..:..:....||::.|:.   |.|.:||.|||
  Rat   257 ---RITRLVLVVVAVFVGCWTPVQVF----VLVQGLGVQPGSETAVAILRFCTALGYVNSCLNPI 314

  Fly   486 TYCFMNASFRRAF 498
            .|.|::.:|:..|
  Rat   315 LYAFLDENFKACF 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 87/398 (22%)
TM helix 1 114..138 CDD:320334 6/23 (26%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 5/21 (24%)
TM helix 4 230..246 CDD:320334 2/15 (13%)
TM helix 5 274..297 CDD:320334 4/22 (18%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 12/27 (44%)
Oprl1NP_001305876.1 7tmA_NOFQ_opioid_R 49..327 CDD:320220 87/398 (22%)
TM helix 1 50..76 CDD:320220 6/25 (24%)
TM helix 2 83..109 CDD:320220 9/26 (35%)
TM helix 3 120..150 CDD:320220 10/29 (34%)
TM helix 4 162..184 CDD:320220 5/21 (24%)
TM helix 5 209..238 CDD:320220 6/33 (18%)
TM helix 6 253..283 CDD:320220 12/45 (27%)
TM helix 7 295..320 CDD:320220 10/24 (42%)

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