DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Cckbr

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_037297.2 Gene:Cckbr / 25706 RGDID:2290 Length:452 Species:Rattus norvegicus


Alignment Length:425 Identity:164/425 - (38%)
Similarity:226/425 - (53%) Gaps:55/425 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LGTSSSPSPSSTPASSSSTST---GMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVF 149
            |.:||:.:.|..|.....|.|   .|.: .|..|::|.|.:|.||:|:|..|..:||:||:||.|
  Rat    29 LNSSSAGNLSCEPPRIRGTGTRELEMAI-RITLYAVIFLMSVGGNVLIIVVLGLSRRLRTVTNAF 92

  Fly   150 LLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAIC 214
            ||:||:||:||.|.|||.||:..|:..||||..:||...:....||:||:..||||:.|||.|||
  Rat    93 LLSLAVSDLLLAVACMPFTLLPNLMGTFIFGTVICKAISYLMGVSVSVSTLNLVAIALERYSAIC 157

  Fly   215 HPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKCREFWPDQGYELFYNIL 279
            .||::|.|||.|||.::|...||...|.|.|..|::.:.|.. |...:|...||....:..:::|
  Rat   158 RPLQARVWQTRSHAARVILATWLLSGLLMVPYPVYTMVQPVG-PRVLQCMHRWPSARVQQTWSVL 221

  Fly   280 LDFLLLVLPLLVLCVAYILITRTLYVGMAKD--------SGRILQQSLPVSATTAGGSAPNPGTS 336
            |..||..:|.:|:.|||.||:|.||:|:..|        |....|..||      ||:||.| ..
  Rat   222 LLLLLFFIPGVVIAVAYGLISRELYLGLHFDGENDSETQSRARNQGGLP------GGAAPGP-VH 279

  Fly   337 SSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKT 401
            .:..|..|   |:|..|:|:           |....:..:.|          ..||.||.|....
  Rat   280 QNGGCRPV---TSVAGEDSD-----------GCCVQLPRSRL----------EMTTLTTPTPGPV 320

  Fly   402 SSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDY 466
            ..|          |.|:||.| :|||||:||.|:||.||:||.|:|.:||.....||.....:..
  Rat   321 PGP----------RPNQAKLL-AKKRVVRMLLVIVLLFFLCWLPVYSVNTWRAFDGPGAQRALSG 374

  Fly   467 TAISFLQLLAYSSSCCNPITYCFMNASFRRAFVDT 501
            ..|||:.||:|.|:|.||:.||||:..||:|.:||
  Rat   375 APISFIHLLSYVSACVNPLVYCFMHRRFRQACLDT 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 153/393 (39%)
TM helix 1 114..138 CDD:320334 10/23 (43%)
TM helix 2 147..169 CDD:320334 14/21 (67%)
TM helix 3 185..207 CDD:320334 9/21 (43%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 8/22 (36%)
TM helix 6 429..451 CDD:320334 12/21 (57%)
TM helix 7 466..491 CDD:320334 13/24 (54%)
CckbrNP_037297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
7tm_GPCRs 55..406 CDD:475119 153/394 (39%)
TM helix 1 57..81 CDD:410628 10/23 (43%)
TM helix 2 90..112 CDD:410628 14/21 (67%)
TM helix 3 128..150 CDD:410628 9/21 (43%)
TM helix 4 173..189 CDD:410628 5/15 (33%)
TM helix 5 216..239 CDD:410628 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..286 10/35 (29%)
TM helix 6 337..359 CDD:410628 12/21 (57%)
TM helix 7 374..399 CDD:410628 13/24 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..452
Blue background indicates that the domain is not in the aligned region.

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