DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Tacr2

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_542946.1 Gene:Tacr2 / 25007 RGDID:3812 Length:390 Species:Rattus norvegicus


Alignment Length:445 Identity:117/445 - (26%)
Similarity:175/445 - (39%) Gaps:143/445 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LGTSSSPSPSSTPASSSSTSTG-----MPVWLI----PSYSMILLFAVLGNLLVISTLVQNRRMR 143
            :||.:..|.::..:...|.:||     ||.|.:    .:|..::|.||.||..||..::.:.|||
  Rat     1 MGTRAIVSDANILSGLESNATGVTAFSMPGWQLALWATAYLALVLVAVTGNATVIWIILAHERMR 65

  Fly   144 TITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFI--------FGEFLCKLFQFSQAASVAVSSW 200
            |:||.|::|||::|     ||| .....|.  |||        ||...|.........::.||.:
  Rat    66 TVTNYFIINLALAD-----LCM-AAFNATF--NFIYASHNIWYFGRAFCYFQNLFPITAMFVSIY 122

  Fly   201 TLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKCRE 265
            ::.||:.:||.||.||.:.|.....:.|  ||..|||..:...:|...:|.:  |...|..||..
  Rat   123 SMTAIAADRYMAIVHPFQPRLSAPSTKA--IIAGIWLVALALASPQCFYSTI--TVDEGATKCVV 183

  Fly   266 FWP-DQGYE--LFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAG 327
            .|| |.|.:  |.|::::..|:..|||||:..||.:|..||:                       
  Rat   184 AWPNDNGGKMLLLYHLVVFVLIYFLPLLVMFGAYSVIGLTLW----------------------- 225

  Fly   328 GSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTT 392
                                                                             
  Rat   226 ----------------------------------------------------------------- 225

  Fly   393 TTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIG 457
                   |.:.|..:.|.|.||.      |::||:.||.:.::||.|.|||.|.:    :..::|
  Rat   226 -------KRAVPRHQAHGANLRH------LQAKKKFVKAMVLVVLTFAICWLPYH----LYFILG 273

  Fly   458 PV---VYEYVDYTAISFLQL--LAYSSSCCNPITYCFMNASFRRAFVDTFKGLPW 507
            ..   :| |..:....:|.|  ||.||:..|||.||.:|..||..|...|:..||
  Rat   274 TFQEDIY-YHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPW 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 105/405 (26%)
TM helix 1 114..138 CDD:320334 8/27 (30%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 4/21 (19%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 9/22 (41%)
TM helix 6 429..451 CDD:320334 9/21 (43%)
TM helix 7 466..491 CDD:320334 11/26 (42%)
Tacr2NP_542946.1 7tmA_SKR_NK2R 34..318 CDD:320670 104/401 (26%)
TM helix 1 35..61 CDD:320670 8/25 (32%)
TM helix 2 68..94 CDD:320670 14/33 (42%)
TM helix 3 106..136 CDD:320670 8/29 (28%)
TM helix 4 147..168 CDD:320670 7/22 (32%)
TM helix 5 194..223 CDD:320670 11/28 (39%)
TM helix 6 243..273 CDD:320670 11/33 (33%)
TM helix 7 286..311 CDD:320670 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..390
Blue background indicates that the domain is not in the aligned region.

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