DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Tacr1

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_036799.1 Gene:Tacr1 / 24807 RGDID:3811 Length:407 Species:Rattus norvegicus


Alignment Length:422 Identity:105/422 - (24%)
Similarity:176/422 - (41%) Gaps:119/422 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PSSTPASSSSTSTGMPVWLI----PSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAIS 156
            |:.:..:|.|.....|.|.|    .:|::|::.:|:||::||..::.::||||:||.||:|||.:
  Rat    13 PNISTNTSESNQFVQPTWQIVLWAAAYTVIVVTSVVGNVVVIWIILAHKRMRTVTNYFLVNLAFA 77

  Fly   157 DMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRS 221
            :..:......|.....:...:.:|.|.||...|...|::..|.:::.|::.:||.||.|||:.|.
  Rat    78 EACMAAFNTVVNFTYAVHNVWYYGLFYCKFHNFFPIAALFASIYSMTAVAFDRYMAIIHPLQPRL 142

  Fly   222 WQTISHAYKIIGF-IWLGGILCMTPIAVFSQLIPTSRPGYCKCREFWPD---QGYELFYNILLDF 282
            ..|   |.|::.| ||:..:|...|...:|  ...:.|....|...||:   :.||..|:|.:..
  Rat   143 SAT---ATKVVIFVIWVLALLLAFPQGYYS--TTETMPSRVVCMIEWPEHPNRTYEKAYHICVTV 202

  Fly   283 LLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTA 347
            |:..|||||:..||.::..||:                        ::..||.||.         
  Rat   203 LIYFLPLLVIGYAYTVVGITLW------------------------ASEIPGDSSD--------- 234

  Fly   348 TAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAA 412
                                                                       |.|:  
  Rat   235 -----------------------------------------------------------RYHE-- 238

  Fly   413 LRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVY--EYVDYTAISFLQLL 475
                    .:.:|::||||:.|:|..|.|||.|.:|. .::..|.|.:|  :::....::.: .|
  Rat   239 --------QVSAKRKVVKMMIVVVCTFAICWLPFHVF-FLLPYINPDLYLKKFIQQVYLASM-WL 293

  Fly   476 AYSSSCCNPITYCFMNASFRRAFVDTFKGLPW 507
            |.||:..|||.||.:|..||..|...|:..|:
  Rat   294 AMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 98/395 (25%)
TM helix 1 114..138 CDD:320334 8/27 (30%)
TM helix 2 147..169 CDD:320334 7/21 (33%)
TM helix 3 185..207 CDD:320334 5/21 (24%)
TM helix 4 230..246 CDD:320334 5/16 (31%)
TM helix 5 274..297 CDD:320334 9/22 (41%)
TM helix 6 429..451 CDD:320334 11/21 (52%)
TM helix 7 466..491 CDD:320334 9/24 (38%)
Tacr1NP_036799.1 7tm_GPCRs 33..316 CDD:475119 96/391 (25%)
TM helix 1 35..59 CDD:410628 7/23 (30%)
TM helix 2 68..90 CDD:410628 7/21 (33%)
TM helix 3 106..128 CDD:410628 5/21 (24%)
TM helix 4 149..165 CDD:410628 4/15 (27%)
TM helix 5 194..217 CDD:410628 9/22 (41%)
TM helix 6 247..269 CDD:410628 11/22 (50%)
TM helix 7 284..309 CDD:410628 9/25 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..407
Blue background indicates that the domain is not in the aligned region.

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