DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and ckr-1

DIOPT Version :9

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_491918.3 Gene:ckr-1 / 188774 WormBaseID:WBGene00020712 Length:421 Species:Caenorhabditis elegans


Alignment Length:405 Identity:120/405 - (29%)
Similarity:195/405 - (48%) Gaps:53/405 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YSMILLFAVLGNLLVISTLV-QNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGE 181
            :.:.|:.::|||.:||.|:: ::.|.|:|||.:|||||.:|:|..::|:|.||:|.|.:.::.|.
 Worm    20 FLLCLILSLLGNAIVILTILGKSHRSRSITNFYLLNLAFADLLRSIICIPSTLLGELTQCWLLGA 84

  Fly   182 FLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPI 246
            .:||:..|.|...|..|::||..|:.|||||||.||.||.|||...|...|..:|     |.:..
 Worm    85 AMCKIVAFLQPVGVCASAYTLAVIAIERYYAICRPLESRKWQTKKRALITISLVW-----CFSFS 144

  Fly   247 AVFSQL-IPTSRPGYCKCREFWPDQG--YELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMA 308
            |..:.| :..:.||...|..   .:|  .:..|.:.|.|.||.:||.::...|..:..||...:.
 Worm   145 ANLTSLFLYDANPGKFTCDS---TKGPLVDFIYQLYLTFTLLFVPLALMVGLYGNVIITLNTAIN 206

  Fly   309 KDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCIL----------VLTATAVYNENSNNNNGNSE 363
            .|...:.||.:..:.         |..:|.|:..:          |::.|..:.|.::.:...:.
 Worm   207 SDHPTVEQQMIEKTL---------PSRASFSDWFVSAVQRVPSMKVVSKTFQFKEKNSLSIPQTS 262

  Fly   364 GSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRV 428
            |             |:.||:..:..:..:|...:...|         ..||.:|:.|.|.:||:|
 Worm   263 G-------------LSVRPSRSSFSSFFSTPRGSFDVT---------MLLRSTNQEKILIAKKKV 305

  Fly   429 VKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQLLAYSSSCCNPITYCFMNAS 493
            .:||..||:.|..||.|.|:...::.:......:..:....|.|.::.|.||..|||||||||.|
 Worm   306 TRMLITLVIVFAFCWVPSYLYWLLLRMAELAATDLWNPGLNSSLTIMTYISSLANPITYCFMNKS 370

  Fly   494 FRRAFVDTFKGLPWR 508
            ||.:.:...:..|.|
 Worm   371 FRSSVLAYCRPKPKR 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_4 120..>244 CDD:304433 53/124 (43%)
7tm_1 128..487 CDD:278431 107/372 (29%)
ckr-1NP_491918.3 7tmA_CCKR-like 30..375 CDD:320124 116/383 (30%)
TM helix 2 50..72 CDD:320124 10/21 (48%)
TM helix 3 88..110 CDD:320124 8/21 (38%)
TM helix 4 133..149 CDD:320124 4/20 (20%)
TM helix 5 172..195 CDD:320124 7/22 (32%)
TM helix 6 303..328 CDD:320124 11/24 (46%)
TM helix 7 343..368 CDD:320124 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I1731
eggNOG 1 0.900 - - E33208_3BDYY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I2204
Isobase 1 0.950 - 0 Normalized mean entropy S5836
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042780at2759
OrthoFinder 1 1.000 - - FOG0001992
OrthoInspector 1 1.000 - - mtm4725
orthoMCL 1 0.900 - - OOG6_105354
Panther 1 1.100 - - O PTHR24238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1306
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.820

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