DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and npr-12

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001293732.1 Gene:npr-12 / 188742 WormBaseID:WBGene00020689 Length:397 Species:Caenorhabditis elegans


Alignment Length:421 Identity:102/421 - (24%)
Similarity:159/421 - (37%) Gaps:151/421 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 GMPVWLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTL 173
            |.|:  :|.|.::..|..|.|.:|:...|:...:|.:.|.|::|||.||::|.|:..||||..:|
 Worm    41 GSPI--VPMYGLVCSFGALANFIVLLAFVRTANLRNLRNSFIVNLAFSDLILCVVTAPVTLYTSL 103

  Fly   174 LRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKI-IGFIWL 237
            ...:.||::.||.....||.:..|||.||..|:.:|......|:|   |:..:.|..: .|.:|:
 Worm   104 NLFWPFGDWSCKFLAGVQAVNTFVSSLTLAFIAMDRVLLTLCPVR---WRLAATAPLLCYGVVWI 165

  Fly   238 GGILCMTP--IAVFSQLIP------TSRP---GYCK------CREFWPDQGYELFYNILLD---- 281
            ..|:...|  :||.|:|.|      .:.|   .||.      |.|.     .|.:.|.::.    
 Worm   166 ISIIVALPYALAVSSKLAPFDPWSDRATPKMLTYCNRQVPEICAEM-----QEAWDNAIVSKTTY 225

  Fly   282 -FLLL----VLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNC 341
             |::|    :|||..|..||..|            |..:|:...||.|                 
 Worm   226 TFVVLGIQYILPLAALAYAYFQI------------GSTIQKRSKVSRT----------------- 261

  Fly   342 ILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSI 406
              |.|...:..:|.|                                                  
 Worm   262 --VDTTRRMQMQNRN-------------------------------------------------- 274

  Fly   407 RVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPL---YVINTMVMLIGPVVYEYVDYT- 467
                               :|.:.:||:|||.:.:||.|:   :|:|.:         |.::|: 
 Worm   275 -------------------RRALLLLFLLVLTYAVCWAPMNIYHVLNGL---------EIINYSQ 311

  Fly   468 -AISFLQLLAYSSSCCNPITYCFMNASFRRA 497
             ...|..|:..||:|.|||.|..:|.|||.|
 Worm   312 NMYIFCHLVGISSTCVNPIVYALVNESFRNA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 100/418 (24%)
TM helix 1 114..138 CDD:320334 6/23 (26%)
TM helix 2 147..169 CDD:320334 11/21 (52%)
TM helix 3 185..207 CDD:320334 9/21 (43%)
TM helix 4 230..246 CDD:320334 4/18 (22%)
TM helix 5 274..297 CDD:320334 8/31 (26%)
TM helix 6 429..451 CDD:320334 9/24 (38%)
TM helix 7 466..491 CDD:320334 10/26 (38%)
npr-12NP_001293732.1 7tmA_NPYR-like 42..343 CDD:320331 101/420 (24%)
TM helix 1 43..69 CDD:320331 8/27 (30%)
TM helix 2 76..101 CDD:320331 13/24 (54%)
TM helix 3 114..144 CDD:320331 11/29 (38%)
TM helix 4 155..176 CDD:320331 5/20 (25%)
TM helix 5 222..251 CDD:320331 10/40 (25%)
TM helix 6 272..302 CDD:320331 12/98 (12%)
TM helix 7 311..336 CDD:320331 9/24 (38%)

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