DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKLR-17D3 and npr-11

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_508234.2 Gene:npr-11 / 182921 WormBaseID:WBGene00016110 Length:402 Species:Caenorhabditis elegans


Alignment Length:401 Identity:93/401 - (23%)
Similarity:150/401 - (37%) Gaps:120/401 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGE 181
            :|.:|:||..:||.|.|..::.|..|||..|.|:||||:||..:.::..|.||...|...:.|..
 Worm    45 AYMLIILFGAIGNFLTIIVVILNPAMRTTRNFFILNLALSDFFVCIVTAPTTLYTVLYMFWPFSR 109

  Fly   182 FLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPI 246
            .|||:....|..::.:|::::.:|:.:||..|..|.:....|.:|..:.|:  ||:..::...|:
 Worm   110 TLCKIAGSLQGFNIFLSTFSIASIAVDRYVLIIFPTKRERQQNLSFCFFIM--IWVISLILAVPL 172

  Fly   247 AVFSQLIPTSRPGYCKCREFWPDQGYELFYNILLD---FLLLVL------PLLVLCVAYILITRT 302
            ...|.|.|......|....:...:..|::..:::.   :.|.||      ||..|..||..|...
 Worm   173 LQASDLTPVFVEPSCDLALYICHEQNEIWEKMIISKGTYTLAVLITQYAFPLFSLVFAYSRIAHR 237

  Fly   303 LYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAG 367
            :.:..|                                           |.|.|           
 Worm   238 MKLRFA-------------------------------------------NRNQN----------- 248

  Fly   368 GGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKML 432
                                :||.|.|                :..|||    .:|.::|...:|
 Worm   249 --------------------VTTNTNT----------------SQRRRS----VVERQRRTHLLL 273

  Fly   433 FVLVLEFFICWTPL---YVINTMVMLIGPVVYEYVD---YTAISFLQLLAYSSSCCNPITYCFMN 491
            ..:|..|.:.|.||   ::.||         :|.|:   .|..|....||..|:|.||:.|.|.|
 Worm   274 VCVVAVFAVAWLPLNVFHIFNT---------FELVNSFSVTTFSICHCLAMCSACLNPLIYAFFN 329

  Fly   492 ASFRRAFVDTF 502
            .:||..|:..|
 Worm   330 HNFRIEFMHLF 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 91/395 (23%)
TM helix 1 114..138 CDD:320334 8/20 (40%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 4/21 (19%)
TM helix 4 230..246 CDD:320334 3/15 (20%)
TM helix 5 274..297 CDD:320334 7/31 (23%)
TM helix 6 429..451 CDD:320334 6/24 (25%)
TM helix 7 466..491 CDD:320334 10/24 (42%)
npr-11NP_508234.2 7tmA_NPYR-like 40..336 CDD:320331 91/395 (23%)
TM helix 1 41..67 CDD:320331 8/21 (38%)
TM helix 2 74..99 CDD:320331 11/24 (46%)
TM helix 3 112..142 CDD:320331 7/29 (24%)
TM helix 4 153..174 CDD:320331 5/22 (23%)
TM helix 5 208..237 CDD:320331 9/28 (32%)
TM helix 6 264..294 CDD:320331 8/29 (28%)
TM helix 7 304..329 CDD:320331 10/24 (42%)

Return to query results.
Submit another query.