DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and Npy6r

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_035065.1 Gene:Npy6r / 18169 MGIID:1098590 Length:371 Species:Mus musculus


Alignment Length:438 Identity:101/438 - (23%)
Similarity:177/438 - (40%) Gaps:147/438 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SSSPSPSSTPASSSST------STGMP----VWLIPSYSMILLFAVLGNL-LVISTLVQNRRMRT 144
            ::.|:|:.|...|:::      |...|    :.|:.:|::||:..:.||| |:|....:.|..:.
Mouse     5 TNQPTPNKTSGKSNNSAFFYFESCQPPFLAILLLLIAYTVILIMGIFGNLSLIIIIFKKQREAQN 69

  Fly   145 ITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCER 209
            :||:.:.||::||:|:.|:|:|.|::.||:.:::||..:|||..:.|:.||:||.::||.|:.||
Mouse    70 VTNILIANLSLSDILVCVMCIPFTVIYTLMDHWVFGNTMCKLTSYVQSVSVSVSIFSLVLIAIER 134

  Fly   210 YYAICHPLRSRSWQ-TISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGY------------C 261
            |..|.:|   |.|: .::|||..|..|||..:....|:.:...|  |:.|.:            .
Mouse   135 YQLIVNP---RGWKPRVAHAYWGIILIWLISLTLSIPLFLSYHL--TNEPFHNLSLPTDIYTHQV 194

  Fly   262 KCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTA 326
            .|.|.||.:..:|.::..|..|...:||..:.:.|:.|                           
Mouse   195 ACVEIWPSKLNQLLFSTSLFMLQYFVPLGFILICYLKI--------------------------- 232

  Fly   327 GGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTT 391
                                                                             
Mouse   233 ----------------------------------------------------------------- 232

  Fly   392 TTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLI 456
               .:.|.|      |......|:.|::: |...|||..||..:|:.|..||.||.:.|      
Mouse   233 ---VLCLRK------RTRQVDRRKENKSR-LNENKRVNVMLISIVVTFGACWLPLNIFN------ 281

  Fly   457 GPVVYEYVDYTAIS--------FLQLLAYSSSCCNPITYCFMNASFRR 496
              |::::.....:|        ...|:|..|:|.||:.|.|:|.:|::
Mouse   282 --VIFDWYHEMLMSCHHDLVFVVCHLIAMVSTCINPLFYGFLNKNFQK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 95/407 (23%)
TM helix 1 114..138 CDD:320334 9/24 (38%)
TM helix 2 147..169 CDD:320334 9/21 (43%)
TM helix 3 185..207 CDD:320334 10/21 (48%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 5/22 (23%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 9/32 (28%)
Npy6rNP_035065.1 7tm_GPCRs 42..329 CDD:475119 94/401 (23%)
TM helix 1 42..63 CDD:320518 8/20 (40%)
TM helix 2 72..94 CDD:320518 9/21 (43%)
TM helix 3 110..132 CDD:320518 10/21 (48%)
TM helix 4 153..169 CDD:320518 4/15 (27%)
TM helix 5 207..230 CDD:320518 5/22 (23%)
TM helix 6 260..282 CDD:320518 9/29 (31%)
TM helix 7 297..322 CDD:320518 8/24 (33%)

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