DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and tkr-3

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001343603.1 Gene:tkr-3 / 177285 WormBaseID:WBGene00006428 Length:400 Species:Caenorhabditis elegans


Alignment Length:474 Identity:97/474 - (20%)
Similarity:177/474 - (37%) Gaps:148/474 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GNGGTVSLAGNATSSYGDDDRDGYMDTEPSDLVTELAFSLGTSSSPSPSSTPASSSSTSTGMPVW 113
            |..|.::.||.|..| ||||   :.:..|.:|:                              :|
 Worm    19 GGAGVLAEAGEAELS-GDDD---FYELTPVELI------------------------------IW 49

  Fly   114 LIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFI 178
            .: .|::|...||:|||||:...:...|:|:||..|:|||..:|:..|:..:|......|.:.:.
 Worm    50 CM-LYAIIAFMAVVGNLLVLYITLFRLRVRSITTYFILNLGFADLFTGIFAIPFKFQAALFQEWF 113

  Fly   179 FGEFLCKLFQFSQAASVAVSSWTLVAISCER----YYAICHPLRSRSWQTISHAYKIIGFIWLGG 239
            ....||::..:.:..::.||.:|||..:...    :::.|..:..||      |.:.:..||:..
 Worm   114 LPRSLCRIVPYVETVALTVSVFTLVTSAVHEFRTMFFSKCSQMSPRS------AKRCVLLIWIMA 172

  Fly   240 ILCMTPIAVFS---QLIPTSRPGYCKCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITR 301
            :|...|..:|.   :....:.....:|...:||.|:...||:.|..:...:|:::|..||.:|..
 Worm   173 VLVSLPHGLFHNTYEFPDDNNTSIVQCLPVYPDAGWWKTYNVYLVIIQYFVPMIILDTAYTMIAV 237

  Fly   302 TLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSA 366
            .::             ||                                          |:...
 Worm   238 KIW-------------SL------------------------------------------SQSRV 247

  Fly   367 GGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKM 431
            ....|.||                  |..:::....||:.::                 .::::.
 Worm   248 ELDETKMA------------------TQKISVVSMVSPNTQL-----------------SQLMRT 277

  Fly   432 LFVLVLEFFICWTPLYVINTMVML--IGPVV--YEYVDYTAISFLQLLAYSSSCCNPITYCFMNA 492
            |.::|..|.:||.||   .|.::|  :.|.:  ::|:: ....|...||.|:||.|||.|...|.
 Worm   278 LIIVVACFSLCWFPL---ETYLLLNELKPEINGWKYIN-LVFFFSHWLAMSNSCLNPIIYGLYNT 338

  Fly   493 SFRRAFVDTFK--GLPWRR 509
            .:...:...|:  |..|:|
 Worm   339 KYNEEYRRLFRQIGCIWQR 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 81/396 (20%)
TM helix 1 114..138 CDD:320334 9/23 (39%)
TM helix 2 147..169 CDD:320334 7/21 (33%)
TM helix 3 185..207 CDD:320334 5/21 (24%)
TM helix 4 230..246 CDD:320334 3/15 (20%)
TM helix 5 274..297 CDD:320334 6/22 (27%)
TM helix 6 429..451 CDD:320334 7/21 (33%)
TM helix 7 466..491 CDD:320334 10/24 (42%)
tkr-3NP_001343603.1 7tm_GPCRs 47..344 CDD:475119 81/427 (19%)
TM helix 1 49..73 CDD:320515 10/24 (42%)
TM helix 2 82..104 CDD:320515 7/21 (33%)
TM helix 3 120..142 CDD:320515 5/21 (24%)
TM helix 4 163..179 CDD:320515 3/15 (20%)
TM helix 5 210..233 CDD:320515 6/22 (27%)
TM helix 6 275..297 CDD:320515 8/24 (33%)
TM helix 7 312..337 CDD:320515 10/25 (40%)

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