DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and ckr-2

DIOPT Version :9

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001367973.1 Gene:ckr-2 / 175341 WormBaseID:WBGene00021439 Length:603 Species:Caenorhabditis elegans


Alignment Length:533 Identity:159/533 - (29%)
Similarity:242/533 - (45%) Gaps:121/533 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 DDDRDGYMDTEPSDLVTELAFSLGTSSSPSPSSTPASSSSTS--------------TGMPVWLIP 116
            ||:.....||..|....||.    .::||.|..|..|:.||:              |.....:..
 Worm     5 DDENITNYDTMNSSSFLELL----NATSPPPIWTLNSNLSTTMSTVHQEEICRFRGTTENYTIAV 65

  Fly   117 SYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGE 181
            ::.||.|.:|:||.:|:..:::.|.||:|||::|:|||.|||:|.|:|||.|||..::..::||.
 Worm    66 TFFMIFLLSVVGNSVVLIVIIKQRAMRSITNIYLMNLAASDMMLSVVCMPPTLVSMVMNCWMFGN 130

  Fly   182 FLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPI 246
            ::||:..:.|...|..|::||..|:.|||:|||.||.||.|||.||||.:|..:|:..|.....:
 Worm   131 YMCKILAYLQPVVVTASAYTLAVIAFERYFAICKPLHSRIWQTRSHAYAMITLVWVIAIAANILM 195

  Fly   247 AVFSQLIPTSRPGYCKCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDS 311
            ....:....|..|| .|....|.. |...|.:.:..:|||:||:|:...|..:..:|..|:..: 
 Worm   196 LFMYEQQTYSSNGY-TCAPIHPPI-YHFAYQVYMTVVLLVIPLVVMAGLYGNVITSLKSGIKLE- 257

  Fly   312 GRILQQSLPV-SATTAGGSAPNPGTSSSS-----NCILV-------LTATAVYNENSNNNNGNSE 363
              |.....|: :|||.|  |.|.|:.|.|     |.:||       .|:....|..|.||..|  
 Worm   258 --IASVDPPLATATTTG--AKNLGSHSDSAHLLLNNVLVGSSQLARATSCIALNTFSCNNTTN-- 316

  Fly   364 GSAGGGSTNMATTTLTTRP----------------------------------------TAPTVI 388
                      ..:|||..|                                        ..|.::
 Worm   317 ----------PFSTLTPPPPIQQKNRSKPQLLQLPGKIDNFEEFRLQCLSDCRSDGVLFPPPAIV 371

  Fly   389 TTTT-----------TTTVTLA-------------KTSSPSIRVHDAALRRSNEAKTLESKKRVV 429
            .:.|           :..:|.:             :.|..||.:.:.:||.::..|:..:|:||:
 Worm   372 ASMTDEQKLSFWNKLSNKLTFSQQDKTVQHPNFGHRKSDTSICLENPSLRSTHTQKSAMAKQRVI 436

  Fly   430 KMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTA-----ISFLQLLAYSSSCCNPITYCF 489
            |||.|:|:.||.||||.|:  ..::||....::.::.:.     .:|:.||.|.|||.|||||||
 Worm   437 KMLIVVVIIFFCCWTPSYI--WWLLLIAGDSFQSLNLSVWNSDINTFITLLTYISSCTNPITYCF 499

  Fly   490 MNASFRRAFVDTF 502
            :|..||.|...||
 Worm   500 LNKKFRNAVYATF 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_4 120..>244 CDD:304433 58/123 (47%)
7tm_1 128..487 CDD:278431 130/440 (30%)
ckr-2NP_001367973.1 7tmA_CCKR-like 61..508 CDD:320124 141/467 (30%)
TM helix 1 63..87 CDD:320124 7/23 (30%)
TM helix 2 96..118 CDD:320124 13/21 (62%)
TM helix 3 134..156 CDD:320124 7/21 (33%)
TM helix 4 179..195 CDD:320124 3/15 (20%)
TM helix 5 221..244 CDD:320124 7/22 (32%)
TM helix 6 436..458 CDD:320124 12/23 (52%)
TM helix 7 476..501 CDD:320124 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I1731
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I2204
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45383
OrthoDB 1 1.010 - - D1042780at2759
OrthoFinder 1 1.000 - - FOG0001992
OrthoInspector 1 1.000 - - mtm4725
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24238
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16973
SonicParanoid 1 1.000 - - X1306
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.200

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