DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and npy2r

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_004911210.1 Gene:npy2r / 100498351 XenbaseID:XB-GENE-983413 Length:408 Species:Xenopus tropicalis


Alignment Length:440 Identity:112/440 - (25%)
Similarity:186/440 - (42%) Gaps:118/440 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DTEPSDLVTEL---AFSLGTSSSPSPSSTPASSSSTS-TGMPVWLIPSYSMILLFAVLGNLLVIS 134
            :....|:.||:   .::.|.::..:..:.|.....|. ..:.|.||.:||.|:|..||||.|||.
 Frog    32 ENRTEDIKTEMNTWFYAAGLTTPYNDLTKPELIDITKLLSVQVVLILAYSSIILLGVLGNSLVIY 96

  Fly   135 TLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSS 199
            .:::.:.|||:||.|::|||:||:::..||:|.|||.|||.::.||..||.|..:||..:|.||:
 Frog    97 VVIKFKTMRTVTNFFIVNLAVSDLMVNTLCLPFTLVYTLLDDWKFGTVLCHLVTYSQGLAVQVST 161

  Fly   200 WTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVF---SQLIPTSRPGYC 261
            .||:.|:.:|:..|.:.|.|:....|  .:.|||..|:...|..:|:|:|   |.::.:|.....
 Frog   162 VTLMVIALDRHRCIVYHLESKISTKI--CFMIIGITWVCSALLASPLAIFKEYSVIVISSDFQIQ 224

  Fly   262 KCREFWP--DQGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSAT 324
            .|.|.||  |..|...|:|.:..:..::||.::..|||.|...|                     
 Frog   225 ACSERWPVGDLNYGTIYSISMLLIQYIVPLAIISYAYIRIWTKL--------------------- 268

  Fly   325 TAGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVIT 389
                                                .:..|.|||:.:                 
 Frog   269 ------------------------------------KNHVSPGGGNDH----------------- 280

  Fly   390 TTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVM 454
                              .|             :.:::..|||..:|:.|.:||.|.:.......
 Frog   281 ------------------YH-------------QRRRKTTKMLVAVVVVFAVCWLPFHAFQLASD 314

  Fly   455 LIGPVVYEYVDYTAI-SFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFK 503
            :.|.|: :..:|..| :...::|..|:..||:.|.:||.::|.||:..||
 Frog   315 IDGKVL-DLNEYKLIYTIFHVIAMCSTFANPLLYGWMNNNYRTAFLTAFK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 102/391 (26%)
TM helix 1 114..138 CDD:320334 13/23 (57%)
TM helix 2 147..169 CDD:320334 10/21 (48%)
TM helix 3 185..207 CDD:320334 9/21 (43%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 5/22 (23%)
TM helix 6 429..451 CDD:320334 8/21 (38%)
TM helix 7 466..491 CDD:320334 7/25 (28%)
npy2rXP_004911210.1 7tmA_NPY2R 74..358 CDD:320521 102/391 (26%)
TM helix 1 75..101 CDD:320521 13/25 (52%)
TM helix 2 108..133 CDD:320521 13/24 (54%)
TM helix 3 146..176 CDD:320521 11/29 (38%)
TM helix 4 187..208 CDD:320521 7/22 (32%)
TM helix 5 238..267 CDD:320521 8/28 (29%)
TM helix 6 283..313 CDD:320521 8/29 (28%)
TM helix 7 326..351 CDD:320521 6/24 (25%)

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