DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and prlhr

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_002940396.1 Gene:prlhr / 100497660 XenbaseID:XB-GENE-994391 Length:343 Species:Xenopus tropicalis


Alignment Length:434 Identity:105/434 - (24%)
Similarity:167/434 - (38%) Gaps:129/434 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SPSPSSTPASSSSTS---TGMPV------WLIPSYSMILLFAVLGNLLVISTLVQNRRMRTITNV 148
            |.:.|..||.:|::|   .|:.:      .:||.||:::...:.||.|:|..:.:.::|..:||.
 Frog     7 STTQSLFPAMASNSSQQFMGLQLIHSYKALIIPCYSLVVFTGIFGNYLLIYVICRTKKMHNVTNF 71

  Fly   149 FLLNLAISDMLLGVLCMPVTLVGTL-LRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYA 212
            .:.|||.||||:...|:|:||.... .|.::||.|||......|..:|.||.:||..|:.:||:|
 Frog    72 LVGNLAFSDMLMCATCVPLTLAYVFEPRGWVFGHFLCYFVFLMQPVTVYVSVFTLTVIAVDRYHA 136

  Fly   213 ICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGYCKCREFWPDQGYE---L 274
            ..:|||.|  .||.....|:..|||...|...|....:..:...:..:..|.|||  .|.|   |
 Frog   137 TVYPLRRR--LTIPTCAYILAGIWLLSCLMAAPALAHTYHVEFPQLDFSICEEFW--FGMEKKRL 197

  Fly   275 FYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSS 339
            .|......|...||.:::.::|:.|:       .|...|::                 ||     
 Frog   198 AYAYSTLILTYALPFIIIALSYLRIS-------VKLKNRVV-----------------PG----- 233

  Fly   340 NCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSP 404
                            |..|..:|                                         
 Frog   234 ----------------NITNVQAE----------------------------------------- 241

  Fly   405 SIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAI 469
                .|.|.|           |:..::|.::|..|.:||.||::.|.|    ..:....:|....
 Frog   242 ----WDRARR-----------KKTFRLLVLVVGAFGMCWLPLHIFNIM----KDIDIHLIDKQYF 287

  Fly   470 SFLQL----LAYSSSCCNPITYCFMNASFRRAFVDTFKGLPWRR 509
            :.:||    ||..|:|.|.:.|.:::.|||......|.   |:|
 Frog   288 NLVQLLCHWLAMMSACTNSLLYAWLHDSFRGELKKMFL---WKR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 95/399 (24%)
TM helix 1 114..138 CDD:320334 8/23 (35%)
TM helix 2 147..169 CDD:320334 10/21 (48%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 5/22 (23%)
TM helix 6 429..451 CDD:320334 7/21 (33%)
TM helix 7 466..491 CDD:320334 8/28 (29%)
prlhrXP_002940396.1 7tmA_PrRP_R 35..320 CDD:320516 95/393 (24%)
TM helix 1 36..62 CDD:320516 8/25 (32%)
TM helix 2 69..94 CDD:320516 13/24 (54%)
TM helix 3 108..138 CDD:320516 11/29 (38%)
TM helix 4 149..170 CDD:320516 6/20 (30%)
TM helix 5 196..225 CDD:320516 7/35 (20%)
TM helix 6 245..275 CDD:320516 12/44 (27%)
TM helix 7 288..313 CDD:320516 8/24 (33%)

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