DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and kissr2

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001165296.1 Gene:kissr2 / 100329185 XenbaseID:XB-GENE-29077375 Length:369 Species:Xenopus tropicalis


Alignment Length:458 Identity:118/458 - (25%)
Similarity:184/458 - (40%) Gaps:131/458 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LAFSLGTSSSPSPSSTPASSSS----TSTGMP-----VWLIP-SYSMILLFAVLGNLLVISTLVQ 138
            |..|.||.:|........::.|    |.||.|     .||:| .:::|:|..::||.|||..:.:
 Frog     2 LNLSWGTINSSMLGDVNRTNESLVNRTETGPPPFLTDAWLVPLFFALIMLVGLIGNSLVIYVISK 66

  Fly   139 NRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEFLCKLFQFSQAASVAVSSWTLV 203
            :|:|||.||.::.|||.:|::..|.|:|.|.....|.:::||:|:||...:.|..:|..:..||.
 Frog    67 HRQMRTATNFYIANLASTDIMFLVCCVPFTATLYPLPSWVFGDFMCKFVAYLQQVTVQATCITLT 131

  Fly   204 AISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIAVFSQLIPTSRPGY-----CKC 263
            |:|.:|.||..:||||...:|...|..:...||:|.:|..|||..:.::    :.||     ..|
 Frog   132 AMSADRCYATLYPLRSLRHRTPKVAMIVSICIWIGSLLLSTPIIPYQKI----QKGYWYGPRTYC 192

  Fly   264 REFWPDQGYE---LFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAKDSGRILQQSLPVSATT 325
            .|.:|....:   :.|..|..:|   ||||.:|:.|.|        |.|..||            
 Frog   193 IEQFPSDVMKKVCILYQFLAVYL---LPLLTICLCYSL--------MLKRVGR------------ 234

  Fly   326 AGGSAPNPGTSSSSNCILVLTATAVYNENSNNNNGNSEGSAGGGSTNMATTTLTTRPTAPTVITT 390
                                                                       |.|..|
 Frog   235 -----------------------------------------------------------PVVEPT 240

  Fly   391 TTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLESKKRVVKMLFVLVLEFFICWTPLYVINTMVML 455
            .....|.|.                  ..:|:..:.::.||:.|:||.|.|||.|:.:.:.....
 Frog   241 DNNYQVQLL------------------SERTIAMRSKISKMVIVIVLLFTICWGPIQLFSLFQGF 287

  Fly   456 IGPVVYEYVDYTAISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGLPW------RRGAGAS 514
            .......|..|...::...::|::|..||:.|.||.||||::|.   |..|:      |.|:..|
 Frog   288 YPGFQANYATYKIKTWANCMSYANSSINPLVYAFMGASFRKSFK---KAFPFMFRNKVRDGSITS 349

  Fly   515 GGV 517
            |.|
 Frog   350 GTV 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 100/394 (25%)
TM helix 1 114..138 CDD:320334 9/24 (38%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 6/21 (29%)
TM helix 4 230..246 CDD:320334 5/15 (33%)
TM helix 5 274..297 CDD:320334 8/22 (36%)
TM helix 6 429..451 CDD:320334 10/21 (48%)
TM helix 7 466..491 CDD:320334 7/24 (29%)
kissr2NP_001165296.1 7tmA_KiSS1R 40..330 CDD:320223 100/393 (25%)
TM helix 1 41..67 CDD:320223 9/25 (36%)
TM helix 2 74..100 CDD:320223 10/25 (40%)
TM helix 3 112..142 CDD:320223 11/29 (38%)
TM helix 4 154..174 CDD:320223 6/19 (32%)
TM helix 5 202..231 CDD:320223 11/39 (28%)
TM helix 6 255..285 CDD:320223 10/29 (34%)
TM helix 7 298..323 CDD:320223 7/24 (29%)

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