DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKLR-17D3 and kiss1r

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001163985.1 Gene:kiss1r / 100316929 XenbaseID:XB-GENE-990075 Length:366 Species:Xenopus tropicalis


Alignment Length:517 Identity:124/517 - (23%)
Similarity:196/517 - (37%) Gaps:179/517 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YNGTGNGGTVSLAGNAT--SSYGDDDRDGYMDTEPSDLVTELAFSLGTSSSPSPSSTPASSSSTS 107
            :|.:..||.|.|..|.:  ..|||..|       |..||                          
 Frog     9 FNDSCLGGMVYLCTNMSDLEKYGDPPR-------PPQLV-------------------------- 40

  Fly   108 TGMPVWLIP-SYSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVG 171
               ..||:| .::|::|..:.||.|||..:.::::|||:||.::.|||.:|::..|.|:|.|...
 Frog    41 ---DAWLVPLFFAMLMLVGLTGNSLVIYVISKHKQMRTVTNFYIANLAATDIIFLVSCVPFTAAL 102

  Fly   172 TLLRNFIFGEFLCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIW 236
            ..|..:|||||:||...:.|..||..:..||.|:|.:|:|...:||:|...:|...|..:...||
 Frog   103 YPLPGWIFGEFMCKFVNYIQQVSVQATCVTLTAMSVDRWYVTVYPLQSLRQRTPRVAAAVSVGIW 167

  Fly   237 LGGILCMTPIAVFSQLIPTSRPGY-----CKCREFWPDQGYE---LFYNILLDFLLLVLPLLVLC 293
            :|..:...|:.:::|||    .||     ..|.|.:|...:|   :.||.|:.:|   |||:.:|
 Frog   168 IGSFIVSIPVPIYNQLI----EGYWFGPQIYCSESFPSVSHEKAFILYNFLVVYL---LPLITIC 225

  Fly   294 VAYILITRTLYVGMAKDSGRILQQSLPVSATTAGGSAPNPGTSSSSNCILVLTATAVYNENSNNN 358
            :.        |..|....||                                             
 Frog   226 IC--------YSAMVYQMGR--------------------------------------------- 237

  Fly   359 NGNSEGSAGGGSTNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSNEAKTLE 423
                                      |:|.....:..|.|....|..:|.               
 Frog   238 --------------------------PSVEPVDNSYQVQLLAERSELMRT--------------- 261

  Fly   424 SKKRVVKMLFVLVLEFFICWTP--LYVINTMVMLIGP-VVYEYVDYTAISFLQLLAYSSSCCNPI 485
               ::.:|:.|:||.|.|||.|  ||:   :.....| ...:|..|....:...::|::|..|||
 Frog   262 ---KISRMVAVIVLLFTICWGPIQLYI---LFQAFSPSFKRDYYTYKVKIWANCMSYTNSSINPI 320

  Fly   486 TYCFMNASFRRAFVDTFKGLPWRRGAGASGGVGGAAGGGLSASQAGAGPGAYASANTNISLN 547
            .|.||.|:||:||...|..| :::..|::|                     .|:||.|..::
 Frog   321 VYAFMGANFRKAFNKVFPFL-FKQRVGSTG---------------------VANANANTEMH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 101/397 (25%)
TM helix 1 114..138 CDD:320334 9/24 (38%)
TM helix 2 147..169 CDD:320334 8/21 (38%)
TM helix 3 185..207 CDD:320334 7/21 (33%)
TM helix 4 230..246 CDD:320334 3/15 (20%)
TM helix 5 274..297 CDD:320334 8/22 (36%)
TM helix 6 429..451 CDD:320334 11/23 (48%)
TM helix 7 466..491 CDD:320334 8/24 (33%)
kiss1rNP_001163985.1 7tmA_KiSS1R 43..333 CDD:320223 101/396 (26%)
TM helix 1 44..70 CDD:320223 9/25 (36%)
TM helix 2 77..103 CDD:320223 10/25 (40%)
TM helix 3 115..145 CDD:320223 11/29 (38%)
TM helix 4 157..177 CDD:320223 4/19 (21%)
TM helix 5 205..234 CDD:320223 11/39 (28%)
TM helix 6 258..288 CDD:320223 12/50 (24%)
TM helix 7 301..326 CDD:320223 8/24 (33%)

Return to query results.
Submit another query.