DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D3 and cckbra

DIOPT Version :10

Sequence 1:NP_001097023.1 Gene:CCKLR-17D3 / 32864 FlyBaseID:FBgn0030954 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001108186.2 Gene:cckbra / 100137117 ZFINID:ZDB-GENE-060503-482 Length:444 Species:Danio rerio


Alignment Length:394 Identity:151/394 - (38%)
Similarity:215/394 - (54%) Gaps:63/394 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YSMILLFAVLGNLLVISTLVQNRRMRTITNVFLLNLAISDMLLGVLCMPVTLVGTLLRNFIFGEF 182
            ||::.|.:|.||||:|..|:.|:||||:||.|||:||:||:::.:.|:|..|:.:||.:||||..
Zfish    63 YSLVFLLSVFGNLLIIVVLIVNKRMRTVTNSFLLSLAVSDLMMAIFCIPFNLIPSLLEDFIFGAA 127

  Fly   183 LCKLFQFSQAASVAVSSWTLVAISCERYYAICHPLRSRSWQTISHAYKIIGFIWLGGILCMTPIA 247
            :||...:....||::|:::||||:.|||.|||:||:||:|||.|||||:|...|:..:..|.|..
Zfish   128 MCKTVAYFMGISVSISTFSLVAIAIERYSAICNPLKSRAWQTRSHAYKVIAATWVLSVAIMVPYP 192

  Fly   248 VFSQLIPTSRPGYC---KCREFWPDQGYELFYNILLDFLLLVLPLLVLCVAYILITRTLYVGMAK 309
            |||.|:|.::....   .||..||....|..:.:||..:|..:|.:|:.:||.||:|.||.|:..
Zfish   193 VFSILVPFNKTNNITAHMCRLEWPISQVEQTWYVLLLSILFFIPGVVMIIAYGLISRELYRGIQF 257

  Fly   310 DSGRILQQSLPVSATTAGGSAPNPGTSS----SSNCILVLTATAVYNENSNNNNGNSEGSAGGGS 370
            :    |:|....|....|   .|.|.||    |..|.:                           
Zfish   258 E----LEQKKDTSGVKNG---LNGGLSSCHDESDGCYI--------------------------- 288

  Fly   371 TNMATTTLTTRPTAPTVITTTTTTTVTLAKTSSPSIRVHDAALRRSN--EAKTLESKKRVVKMLF 433
                  .::.:|.|..:.|.||:..|   ||..|          |||  ||| |.:||||::||.
Zfish   289 ------QVSKKPPAMELSTLTTSGPV---KTDRP----------RSNTSEAK-LIAKKRVIRMLI 333

  Fly   434 VLVLEFFICWTPLYVINTMVMLIGPVVYEYVDYTAISFLQLLAYSSSCCNPITYCFMNASFRRAF 498
            ::|..||:||.|||..||............:....|||:|||:|:|:|.|||.|||||..||:|.
Zfish   334 IIVAMFFVCWMPLYSANTWKAFDQISAQRALSGAPISFIQLLSYTSACVNPIIYCFMNTRFRKAL 398

  Fly   499 VDTF 502
            :.||
Zfish   399 LATF 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D3NP_001097023.1 7tm_GPCRs 112..498 CDD:475119 148/388 (38%)
TM helix 1 114..138 CDD:320334 10/19 (53%)
TM helix 2 147..169 CDD:320334 10/21 (48%)
TM helix 3 185..207 CDD:320334 8/21 (38%)
TM helix 4 230..246 CDD:320334 4/15 (27%)
TM helix 5 274..297 CDD:320334 6/22 (27%)
TM helix 6 429..451 CDD:320334 10/21 (48%)
TM helix 7 466..491 CDD:320334 15/24 (63%)
cckbraNP_001108186.2 7tmA_CCK-BR 57..398 CDD:320645 148/388 (38%)
TM helix 1 58..84 CDD:320645 10/20 (50%)
TM helix 2 91..117 CDD:320645 12/25 (48%)
TM helix 3 129..159 CDD:320645 13/29 (45%)
TM helix 4 172..193 CDD:320645 8/20 (40%)
TM helix 5 221..250 CDD:320645 10/28 (36%)
TM helix 6 323..353 CDD:320645 16/29 (55%)
TM helix 7 366..391 CDD:320645 15/24 (63%)

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