DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12609 and CG10904

DIOPT Version :10

Sequence 1:NP_728194.1 Gene:CG12609 / 32862 FlyBaseID:FBgn0030952 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster


Alignment Length:182 Identity:40/182 - (21%)
Similarity:73/182 - (40%) Gaps:34/182 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EIQRLERQKRLLAMRHAASSLPSSQEKEFNLRLVDLYREQPCLWKITLPAYKDADMKRSSWEKIA 67
            |.|..:||:|...:          ..:|...:|::|||...|||......||:.|.:..:.|.|.
  Fly    10 ETQLTKRQRRKQTI----------WTREKIAKLIELYRSSDCLWNHYSELYKNKDCRAKAIESIC 64

  Fly    68 SQLGSHLSAEFIRCRMRNMRYQLNVYKLQMIEYQM-TSGKGKPPEKPYYVDRF-------AFLEQ 124
            :.|  .::......::.|:|.|.|. :|:.:|.:: .||..:..||....:.|       :.:|.
  Fly    65 ASL--EITKHDYGKKVHNLRNQFNA-ELKKLERRLEESGGDRDSEKACRWEHFKTLMFLRSVIEP 126

  Fly   125 EDGAEESDNQQSNANAKKQNIPRSERFAKLWSDFNLKSMTKRESTDASSKES 176
            ..|.:             |..|..:..:||...:..:.:.|:..:...|.||
  Fly   127 RPGYQ-------------QGAPGKKLVSKLDMCYPDQDVEKQSQSSIESLES 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12609NP_728194.1 MADF_DNA_bdg 35..122 CDD:463144 24/94 (26%)
CG10904NP_611860.1 MADF 31..125 CDD:214738 24/96 (25%)

Return to query results.
Submit another query.