DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and ednrb

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_012812722.1 Gene:ednrb / 779931 XenbaseID:XB-GENE-963709 Length:433 Species:Xenopus tropicalis


Alignment Length:587 Identity:112/587 - (19%)
Similarity:189/587 - (32%) Gaps:226/587 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SFFGLTIDAF-YHYLRQALPLAKEAAIHLNASNEISAVGDGVTITGTPGDLLNYSGLE-LDLGLD 135
            :..|.||.|| ..|...:.|          :||...:..:|:|.|      :|.|.|: ||....
 Frog    13 ALLGFTIVAFGEEYGSSSKP----------SSNGRLSFLEGMTTT------MNSSFLKALDANAS 61

  Fly   136 LDLNLDMDLATTPSSSTLAPAVTVRTPGNRSVVRVSADVPIWVVPCYSAILLCAVVGNLLVVLTL 200
            :. |:..:.:.....:...|....:|....:...:::     |:.|  .|.:..:.||..::..:
 Frog    62 IQ-NIQANKSLLNGKNKFPPMCDGQTEIKDTFRYITS-----VISC--LIFIVGITGNSALLRII 118

  Fly   201 VQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWT 265
            .:|..||....:.:.:||:.|:|..:..:|:|....|.:.:.||..:|||:.|.|.|:|.::..:
 Frog   119 YKNTCMRNGPYILIASLALGDLLHIIIDIPITTYKLLAQDWPFGVEICKLVPFLQKATVGITMLS 183

  Fly   266 LVAISCERYYAICHPLRSRT-----WQTINHANKIIAIIWLGSLVCMTPIAAFSQLMPTSRPG-- 323
            |.|:|.:||.|:......:|     |..:.     ||.|||.|.....|......|:.|:..|  
 Frog   184 LCALSIDRYRAVASWAHVKTTGVSKWIAVE-----IAFIWLVSSALAIPEVIGYDLIVTNYRGEL 243

  Fly   324 LRKCREQWPADSLNYERAYNLFLDLAL----LVLPLLALSFTYLFITRTLYVSMRNERAMNFGSS 384
            |:.|... |..:..:.|.|..:.|:.|    ..|||:..:..|..:|..|:              
 Frog   244 LQTCMLH-PIQTSAFMRFYKTYKDMWLFSFYFCLPLVLTAVFYTLMTFELF-------------- 293

  Fly   385 GPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISG 449
                              |:.||.                                         
 Frog   294 ------------------RKKNGM----------------------------------------- 299

  Fly   450 GGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDN 514
                                                                             
 Frog   300 ----------------------------------------------------------------- 299

  Fly   515 ESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPT 579
                      :|.||:          :|..::.:.||:|.|||.:.:||.||:    ::.:|..|
 Frog   300 ----------ALAITD----------TLRQRREIAKMVFYLVLVYAVCWLPLH----LSRILKFT 340

  Fly   580 VYEYVGYTS---ISFLQLLAY-------SSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAP 634
            .|:......   :|||.||.|       .:||.|||....::..||.           |.:.|..
 Frog   341 FYDEKDAKRCDFLSFLLLLDYIGINMANLNSCINPIALYLVSTKFRN-----------CFKSCLF 394

  Fly   635 CC 636
            ||
 Frog   395 CC 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 88/461 (19%)
TM helix 1 178..202 CDD:410628 5/23 (22%)
TM helix 2 211..233 CDD:410628 5/21 (24%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 6/15 (40%)
TM helix 5 340..363 CDD:410628 7/26 (27%)
TM helix 6 549..571 CDD:410628 10/21 (48%)
TM helix 7 586..611 CDD:410628 11/34 (32%)
ednrbXP_012812722.1 7tmA_ET-BR 94..389 CDD:320642 88/480 (18%)
TM helix 1 95..121 CDD:320642 5/32 (16%)
TM helix 2 128..154 CDD:320642 6/25 (24%)
TM helix 3 166..196 CDD:320642 13/29 (45%)
TM helix 4 208..228 CDD:320642 7/24 (29%)
TM helix 5 262..287 CDD:320642 6/24 (25%)
TM helix 6 308..338 CDD:320642 10/33 (30%)
TM helix 7 357..382 CDD:320642 8/24 (33%)

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