DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and prlhr2a

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:514 Identity:113/514 - (21%)
Similarity:180/514 - (35%) Gaps:194/514 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 TVRTPGNRSVVRVSADVPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDI 222
            |.|.|....|..:.:..|: ::|||:.::|..|.||.|::..:.|.::|..:||.|:.|||.||:
Zfish    42 TKRNPQFVGVELLQSFKPL-IIPCYALVVLVGVFGNYLLLYVICQTKKMHNVTNFFIGNLAFSDM 105

  Fly   223 LLGVFCMPVTLVGTL-LRHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTW 286
            |:...|:|.||.... .|.::||..:|.|:...|..:|.||.:||.||..:||||..|||:.|. 
Zfish   106 LMCATCVPFTLAYAFNPRGWVFGRFMCYLVFLIQPVTVYVSVFTLTAIGVDRYYATVHPLKKRI- 169

  Fly   287 QTINHANKIIAIIWLGSLVCMTPIAAFSQLMPTSRPGLRKCREQW---PADSLNYERAYN-LFLD 347
             ::.....:::.||:.|...:.|..|.:..:.....|...|.|.|   ..:.|.|  ||: ||: 
Zfish   170 -SVLACTYLLSGIWILSCGLVAPAVAHTYHVEFKDEGFTICEEFWMGQEKERLAY--AYSTLFI- 230

  Fly   348 LALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQS 412
              ..||||.||..:||.|:    |.:||                                  |  
Zfish   231 --TYVLPLSALCISYLCIS----VKLRN----------------------------------C-- 253

  Fly   413 LDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQING 477
               :||.                                                          
Zfish   254 ---VVPG---------------------------------------------------------- 257

  Fly   478 GGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSL 542
                               ||.:.|.:.|:                                   
Zfish   258 -------------------HRTQSQAEAQR----------------------------------- 268

  Fly   543 ESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVYEYVGYTSISFLQLLAY----SSSCCN 603
            ..|::..:::.::|..|.|||.|:.|.|    :|.....:.:.......:|||.:    ||||||
Zfish   269 ARKRKTFRLVSLVVAAFGICWLPISVFN----VLRDIDIDLIDKRYFLLIQLLCHLCGMSSSCCN 329

  Fly   604 PITYCFMNASFRRAFVDTFKGMRVCERLCAPCCFWRRRSKNETNLSVAGNSIALANSVM 662
            |..|.:::..||.    ..:.|..|.|              ...:.:..|:.|.|:.|:
Zfish   330 PFLYAWLHDRFRA----ELRKMFTCHR--------------RIGIGIPANNCATASVVL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 101/449 (22%)
TM helix 1 178..202 CDD:410628 8/23 (35%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 9/21 (43%)
TM helix 4 294..310 CDD:410628 3/15 (20%)
TM helix 5 340..363 CDD:410628 10/23 (43%)
TM helix 6 549..571 CDD:410628 7/21 (33%)
TM helix 7 586..611 CDD:410628 11/28 (39%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 102/455 (22%)
TM helix 1 60..86 CDD:320516 8/26 (31%)
TM helix 2 93..118 CDD:320516 13/24 (54%)
TM helix 3 132..162 CDD:320516 14/29 (48%)
TM helix 4 173..194 CDD:320516 4/20 (20%)
TM helix 5 220..249 CDD:320516 15/37 (41%)
TM helix 6 269..299 CDD:320516 9/33 (27%)
TM helix 7 312..337 CDD:320516 11/24 (46%)

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