DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and hcrtr2

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001073337.1 Gene:hcrtr2 / 561260 ZFINID:ZDB-GENE-070228-3 Length:424 Species:Danio rerio


Alignment Length:506 Identity:127/506 - (25%)
Similarity:198/506 - (39%) Gaps:174/506 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 WV-VPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRH 240
            || :..|..:.|.::|||.||...:.:|..|||:||.|::||:.:|||:.:.|:|.:||..:...
Zfish    55 WVLIAGYILVFLVSLVGNTLVCFAVWKNHHMRTVTNYFIVNLSFADILVTITCLPASLVVDITET 119

  Fly   241 FIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLV 305
            :.||:.|||::.:.|..||:||..||..|:.:|:|||||||:.::  |...|.|.|.:|||.|.:
Zfish   120 WFFGQTLCKILPYLQTISVSVSVLTLSCIAQDRWYAICHPLKFKS--TAKRARKSIVLIWLVSCI 182

  Fly   306 CMTPIAAF---SQLMP--TSRPGL-RKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLF 364
            .|.|.|..   |.|||  |::..| ..|.|||| |.: |.:.|:....:.....||..:...|:.
Zfish   183 MMIPQAVVMESSSLMPELTNKTSLFTVCDEQWP-DEI-YPKVYHTCFFIVTYFAPLCLMVLAYIQ 245

  Fly   365 ITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHH 429
            |                                            |..                 
Zfish   246 I--------------------------------------------CHK----------------- 249

  Fly   430 HSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCS 494
                                         |:|           |||.|....|            
Zfish   250 -----------------------------LWC-----------QQIPGSSSVL------------ 262

  Fly   495 RVHRMRQQMQLQQQGY-VSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLE 558
                .||...||...: |...||.:...|..|.           |.|.::::::..:||.|::..
Zfish   263 ----QRQWKSLQCSAHAVGSGESVKVRTSTVSA-----------EAKQVKARRKTARMLMVVLFV 312

  Fly   559 FFICWTPLYVINTMTMLLG--------PTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFR 615
            |.:|:.|:.::|.|..:.|        .|||.:     .:|...|.|::|..|||.|.|::..||
Zfish   313 FALCYLPISILNIMKRVFGAFKNTGNRETVYAW-----FTFSHWLIYANSAANPIIYNFLSGKFR 372

  Fly   616 RAFVDTFKGMRVCERLCAPCCFWR-----RRSKNET------NLSVAGNSI 655
                :.||...:|:      |..|     :|::..|      :||...|::
Zfish   373 ----EEFKAAFICQ------CSGRGETHKQRARGRTSTDSRKSLSTQVNNL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 117/456 (26%)
TM helix 1 178..202 CDD:410628 8/24 (33%)
TM helix 2 211..233 CDD:410628 9/21 (43%)
TM helix 3 249..271 CDD:410628 9/21 (43%)
TM helix 4 294..310 CDD:410628 7/15 (47%)
TM helix 5 340..363 CDD:410628 3/22 (14%)
TM helix 6 549..571 CDD:410628 6/21 (29%)
TM helix 7 586..611 CDD:410628 9/24 (38%)
hcrtr2NP_001073337.1 7tmA_OXR 55..375 CDD:320336 117/460 (25%)
TM helix 1 56..82 CDD:320336 8/25 (32%)
TM helix 2 89..115 CDD:320336 12/25 (48%)
TM helix 3 127..157 CDD:320336 13/29 (45%)
TM helix 4 168..189 CDD:320336 9/20 (45%)
TM helix 5 220..249 CDD:320336 6/72 (8%)
TM helix 6 297..327 CDD:320336 7/29 (24%)
TM helix 7 343..368 CDD:320336 10/29 (34%)
Orexin_rec2 390..>424 CDD:427531 5/24 (21%)

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