DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and tacr3a

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001243567.1 Gene:tacr3a / 555482 ZFINID:ZDB-GENE-090312-106 Length:399 Species:Danio rerio


Alignment Length:492 Identity:115/492 - (23%)
Similarity:174/492 - (35%) Gaps:180/492 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 VPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLL 238
            |.:|.| .||:||..||.|||:|:..::.::||||:||.||||||.||..:..|...:..|....
Zfish    25 VALWSV-AYSSILAIAVFGNLIVMWIILAHKRMRTVTNYFLLNLAFSDASMAAFNTLINFVYATH 88

  Fly   239 RHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAI-IWLG 302
            ..:.|||..||...|....||..|.:::.||:.:||.||.|||:.|...|   |.|:|.: ||:.
Zfish    89 GDWYFGEAYCKFHNFFPVTSVFASIYSMSAIAVDRYMAIIHPLKPRLSAT---ATKVIIVCIWVL 150

  Fly   303 SLVCMTPIAAFSQLMPTSRPGLRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITR 367
            ::|...|:..||.:....:..|  |...||..|.: ...|::.:.:.:.||||:.:...|..:..
Zfish   151 AVVLAFPLCFFSTIKKLPKRTL--CYVAWPRPSED-PFMYHIIVAMLVYVLPLVVMGINYTIVGL 212

  Fly   368 TLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQ 432
            ||:                                                              
Zfish   213 TLW-------------------------------------------------------------- 215

  Fly   433 YYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVH 497
                                                          ||.:.|..:.|        
Zfish   216 ----------------------------------------------GGEIPGDSSDN-------- 226

  Fly   498 RMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFIC 562
                     .||                               .|.:|::||||:.::|:.|..|
Zfish   227 ---------YQG-------------------------------QLRAKRKVVKMMIIVVVTFAFC 251

  Fly   563 WTPLYVINTMTML---LGPTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKG 624
            |.|.:|...:|.|   |....:....|.||.:   ||.||:..|||.||.:|:.||..|...|:.
Zfish   252 WLPYHVYFLVTGLNKQLARWKFIQQIYLSIMW---LAMSSTMYNPIIYCCLNSRFRAGFKRVFRW 313

  Fly   625 MRVCERLCAPCCFWRRRSKNETNLSVAGNSIALANSV 661
                      |.|.:....:|..|....:.:|..:|:
Zfish   314 ----------CPFVQVSDYDELELRAMRHKVARQSSM 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 106/444 (24%)
TM helix 1 178..202 CDD:410628 11/23 (48%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 7/21 (33%)
TM helix 4 294..310 CDD:410628 5/16 (31%)
TM helix 5 340..363 CDD:410628 5/22 (23%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 12/24 (50%)
tacr3aNP_001243567.1 7tm_GPCRs 26..307 CDD:475119 106/446 (24%)
TM helix 1 28..52 CDD:320669 12/24 (50%)
TM helix 2 61..83 CDD:320669 10/21 (48%)
TM helix 3 99..121 CDD:320669 7/21 (33%)
TM helix 4 142..158 CDD:320669 4/15 (27%)
TM helix 5 185..208 CDD:320669 5/22 (23%)
TM helix 6 238..260 CDD:320669 9/21 (43%)
TM helix 7 275..300 CDD:320669 12/27 (44%)

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