DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and SIFaR

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_650966.2 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster


Alignment Length:637 Identity:143/637 - (22%)
Similarity:217/637 - (34%) Gaps:265/637 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 PLAKEAAIHLNASNEISA----VGDGVTITGTPGDLLNYSGLELDLGLDLDLNLDMDLATTPSSS 151
            |.|......|.|:...||    .|..:.|........ ||.|         |||      :|:::
  Fly   119 PAASSLLATLAATTTASARGSLAGKSLAIADATSSTY-YSNL---------LNL------SPATT 167

  Fly   152 TLAPAVTVRTPGNRSVVR-----VSADV---PIW-------VVPC--YSAILLCAVVGNLLVVLT 199
            :|..|.......|.|.:|     .|.|.   |::       :|.|  |..:.|..::||..|:..
  Fly   168 SLISAAAATKSYNDSALRWEQLDGSVDFGFDPLYRHSLAMSMVYCVAYIVVFLVGLIGNSFVIAV 232

  Fly   200 LVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSW 264
            :::..||||:||.|::||||:|||:.|||:|.||:|.:...::.|.|:||.:.:.|..|||.|.:
  Fly   233 VLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQGVSVAASVY 297

  Fly   265 TLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIAAFSQLMPT---------- 319
            :|:|:|.:|:.||..||:.   .|...|..:|..||:.:||...|...|..|:|.          
  Fly   298 SLIAVSLDRFIAIWWPLKQ---MTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAEEVFSDALVS 359

  Fly   320 --SRPGLRKCREQWPADSLNYERAYNLFLDLALLV----LPLLALSFTYLFITRTLYVSMRNERA 378
              |:|.. .|:|.||..:..     ||:..||.||    ||:..::..|:.|  .:.||.|:   
  Fly   360 AYSQPQF-LCQEVWPPGTDG-----NLYFLLANLVACYLLPMSLITLCYVLI--WIKVSTRS--- 413

  Fly   379 MNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSK 443
                                                  :|.:....|                  
  Fly   414 --------------------------------------IPGESKDAQ------------------ 422

  Fly   444 RRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQ 508
                                                                :.||:|       
  Fly   423 ----------------------------------------------------MDRMQQ------- 428

  Fly   509 GYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMT 573
                                              :||.:|:|||..:|:.|.:.|.|||||    
  Fly   429 ----------------------------------KSKVKVIKMLVAVVILFVLSWLPLYVI---- 455

  Fly   574 MLLGPTVYEYVGYTSISF------------------LQLLAYSSSCCNPITYCFMNASFRRAFVD 620
                        :..|.|                  .|.|..|:||.|||.|. :|..:||.|..
  Fly   456 ------------FARIKFGSDISQEEFEILKKVMPVAQWLGSSNSCINPILYS-VNKKYRRGFAA 507

  Fly   621 TFKGMRVCERLCAPCCFWRRRSKNETNLSVAGNSIALANSVMSSHTILESPR 672
            ..|....|.||           :...|:::|.::   .::..|||....|.|
  Fly   508 IIKSRSCCGRL-----------RYYDNVAIASST---TSTRKSSHYHQNSSR 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 108/483 (22%)
TM helix 1 178..202 CDD:410628 7/25 (28%)
TM helix 2 211..233 CDD:410628 13/21 (62%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 5/15 (33%)
TM helix 5 340..363 CDD:410628 8/26 (31%)
TM helix 6 549..571 CDD:410628 11/21 (52%)
TM helix 7 586..611 CDD:410628 11/42 (26%)
SIFaRNP_650966.2 7tmA_CCKR-like 209..505 CDD:320124 108/475 (23%)
TM helix 1 210..236 CDD:320124 7/25 (28%)
TM helix 2 243..269 CDD:320124 16/25 (64%)
TM helix 3 281..311 CDD:320124 12/29 (41%)
TM helix 4 322..340 CDD:320124 6/17 (35%)
TM helix 5 379..404 CDD:320124 9/24 (38%)
TM helix 6 429..459 CDD:320124 14/45 (31%)
TM helix 7 474..498 CDD:320124 9/24 (38%)

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