DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and CrzR

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster


Alignment Length:576 Identity:109/576 - (18%)
Similarity:195/576 - (33%) Gaps:232/576 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LPLAKEAAIHLNASNEISAVGDGVT-------ITGTPGDLLNYSGLELDLGLDLDLNL-DMDLAT 146
            ||....|::.|...||:  |.:..|       :.|...:::||:...:|:|:.:..:: ::.::|
  Fly    11 LPSVPSASMDLETENEV--VSNWSTLANFTRLVAGAAPEIVNYTLNMIDVGVGMATDISNLSVST 73

  Fly   147 TP-------SSSTLAPAVTVRTPGNRSVVRVSADVPIWV--------------VPCYSAILLCAV 190
            ||       :||:||     .|........::..||..|              |...:.:.|.::
  Fly    74 TPLPAYAISNSSSLA-----HTNSRHEAPPMAEQVPEHVMDHAPQLSRSGLLKVYVLAVMALFSL 133

  Fly   191 VGNLLVVLTLVQNRRMR-----TITNVF--LLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLC 248
            :||||.:..:.:.|..|     |.:.::  :.:|:|:|:|:..||:...........::..||.|
  Fly   134 LGNLLTIWNIYKTRISRRNSRHTWSAIYSLMFHLSIADVLVTWFCIIGEAAWCYTVQWLANELTC 198

  Fly   249 KLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHA---NKIIAIIWLGSLVCMTP- 309
            ||::..|..|:.:|::.||.|..:|:.|:.:|::|     :|.|   ::::...::.|||...| 
  Fly   199 KLVKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMKS-----LNMAKRCHRLLGGTYILSLVLSLPQ 258

  Fly   310 -----------IAAFSQLMPTSRPGLRKC------REQWPADSLNYERAYNLFLDLALLVLPLLA 357
                       :..|.|           |      ...|      .|:.|..|..:...:|||..
  Fly   259 FFIFHVARGPFVEEFYQ-----------CVTHGFYTADW------QEQMYATFTLVFTFLLPLCI 306

  Fly   358 LSFTYLFITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTI-VPHQH 421
            |..||:...||:                             :.|::...||...:..|. :|.|.
  Fly   307 LFGTYMSTFRTI-----------------------------SSSEKMFQGSKLANYSTAKLPTQT 342

  Fly   422 NPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTG 486
            |                    ::|||               ..|.:||||               
  Fly   343 N--------------------RQRLI---------------HKAKMKSLR--------------- 357

  Fly   487 AGNGECCSRVHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKM 551
                                                                            :
  Fly   358 ----------------------------------------------------------------I 358

  Fly   552 LFVLVLEFFICWTPLYVINTMTMLLGPTVYEYVGYTSISFLQLLAYSSSCCNPITY 607
            ..|:::.|.|||||.||:..|.|.|.|.  :.:|......:.....|:|..||:.|
  Fly   359 SVVIIIAFLICWTPYYVMMIMFMFLNPD--KRLGDDLQDAIFFFGMSNSLVNPLIY 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 86/474 (18%)
TM helix 1 178..202 CDD:410628 7/37 (19%)
TM helix 2 211..233 CDD:410628 6/23 (26%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 4/27 (15%)
TM helix 5 340..363 CDD:410628 7/22 (32%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 5/22 (23%)
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 85/461 (18%)
TM helix 1 120..146 CDD:320506 6/25 (24%)
TM helix 2 160..187 CDD:320506 6/26 (23%)
TM helix 3 198..228 CDD:320506 11/29 (38%)
TM helix 4 239..260 CDD:320506 4/20 (20%)
TM helix 5 288..317 CDD:320506 9/28 (32%)
TM helix 6 350..380 CDD:320506 14/108 (13%)
TM helix 7 391..416 CDD:320506 5/22 (23%)

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