DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Hcrtr2

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_945200.1 Gene:Hcrtr2 / 387285 MGIID:2680765 Length:460 Species:Mus musculus


Alignment Length:118 Identity:27/118 - (22%)
Similarity:47/118 - (39%) Gaps:33/118 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FTFIIYLVSPTTLLNLFYGEFDPYLSAD-RKVVVYEKMIEALRNMDKYCKDRRFYC--------- 72
            ||...||:...|:.|   || .||.... .|...:::.::.  :|..:..::.:.|         
Mouse    98 FTRKQYLIEHMTIHN---GE-KPYTCQQCGKSFTWKQNLKI--HMRTHTDEKPYTCHQCGKSFAR 156

  Fly    73 KRPETRHVDCRRVLRGDKAYL-----------QSLTGINRIPLIENPFLNLTC 114
            .:..::|:.   |..|:|.|.           |:|||..|:...|.|:   ||
Mouse   157 NQNLSKHMG---VHTGEKPYTCECCGKCFTRQQNLTGHMRVHTGEKPY---TC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119
TM helix 1 178..202 CDD:410628
TM helix 2 211..233 CDD:410628
TM helix 3 249..271 CDD:410628
TM helix 4 294..310 CDD:410628
TM helix 5 340..363 CDD:410628
TM helix 6 549..571 CDD:410628
TM helix 7 586..611 CDD:410628
Hcrtr2NP_945200.1 Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43614 33..49
7tmA_OXR 55..375 CDD:320336 27/118 (23%)
TM helix 1 56..82 CDD:320336
TM helix 2 89..115 CDD:320336 8/20 (40%)
TM helix 3 127..157 CDD:320336 2/31 (6%)
TM helix 4 168..189 CDD:320336 4/20 (20%)
TM helix 5 220..249 CDD:320336
TM helix 6 297..327 CDD:320336
TM helix 7 343..368 CDD:320336
Orexin_rec2 386..443 CDD:427531
Blue background indicates that the domain is not in the aligned region.

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