DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Lkr

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:558 Identity:121/558 - (21%)
Similarity:193/558 - (34%) Gaps:210/558 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 MDLATTPSSSTLAPAVTVRTPGNRSVVRVSADVPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRM 206
            |||....|.....|.........| :....|::...:...|..|.:.||:||.||:..:...|:|
  Fly     3 MDLIEQESRLEFLPGAEEEAEFER-LYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATTRQM 66

  Fly   207 RTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVAISC 271
            ||:||:::.|||.:|:::|:||:|......||:.:.....:|....|.||.||.||.:||.||:.
  Fly    67 RTVTNMYIANLAFADVIIGLFCIPFQFQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAI 131

  Fly   272 ERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIA-AF------------SQLMPTSRPG 323
            :|:.||.:|||:|..:.:  :..||..||:.:|:...|.| ||            ::....:|| 
  Fly   132 DRHRAIINPLRARPTKFV--SKFIIGGIWMLALLFAVPFAIAFRVEELTERFRENNETYNVTRP- 193

  Fly   324 LRKCREQWPAD----SLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSS 384
              .|..:..:|    |..|...:..:|      :|...:||.|:.:...|:           |:.
  Fly   194 --FCMNKNLSDDQLQSFRYTLVFVQYL------VPFCVISFVYIQMAVRLW-----------GTR 239

  Fly   385 GPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISG 449
            .|                                                               
  Fly   240 AP--------------------------------------------------------------- 241

  Fly   450 GGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDN 514
                                                  ||.:                       
  Fly   242 --------------------------------------GNAQ----------------------- 245

  Fly   515 ESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPT 579
            :||..:|                    |::||:|:|||.::|:.|.:||.||.:.|    :|..|
  Fly   246 DSRDITL--------------------LKNKKKVIKMLIIVVIIFGLCWLPLQLYN----ILYVT 286

  Fly   580 VYEYVGYTSISFL----QLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCCFWRR 640
            :.|...|..||.:    ..||.|:||.||..|...|..|:|.|...|           ..||.:.
  Fly   287 IPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKRF-----------AACFCKF 340

  Fly   641 RSKNET-----NLSVAGNSI--ALANSVMSSHTILESP 671
            ::..:.     ::....:||  ..|||.|...:.|..|
  Fly   341 KTSMDAHERTFSMHTRASSIRSTYANSSMRIRSNLFGP 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 102/461 (22%)
TM helix 1 178..202 CDD:410628 8/23 (35%)
TM helix 2 211..233 CDD:410628 9/21 (43%)
TM helix 3 249..271 CDD:410628 11/21 (52%)
TM helix 4 294..310 CDD:410628 5/15 (33%)
TM helix 5 340..363 CDD:410628 4/22 (18%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 11/28 (39%)
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 102/462 (22%)
TM helix 1 37..63 CDD:320515 8/25 (32%)
TM helix 2 70..95 CDD:320515 10/24 (42%)
TM helix 3 108..138 CDD:320515 14/29 (48%)
TM helix 4 149..170 CDD:320515 6/22 (27%)
TM helix 5 205..234 CDD:320515 7/34 (21%)
TM helix 6 254..284 CDD:320515 13/33 (39%)
TM helix 7 297..322 CDD:320515 9/24 (38%)

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