DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and CCHa1-R

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster


Alignment Length:543 Identity:108/543 - (19%)
Similarity:189/543 - (34%) Gaps:213/543 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 LLNYSGLELDLGLDLDLNLD-----------------MDLATTPSSSTLAPAVTVRTPGNRSVVR 169
            :.|...:|.||.:::.|:..                 .|||...|.||..|.:...:..|.|.: 
  Fly     2 IANLVSMETDLAMNIGLDTSGEAPTALPPMPNVTETLWDLAMVVSQSTQWPLLDTGSSENFSEL- 65

  Fly   170 VSADVP---------IWVVP-CYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILL 224
            |:.:.|         .::|| .::.|.:..|:||..:::..:..|:||.:.|.::|:||::|:|:
  Fly    66 VTTETPYVPYGRRPETYIVPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLV 130

  Fly   225 GVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRS------ 283
            .:..:|:......:.::.:|..||.|.:|.:..|:.||.:||.|:|.:||:||..|||.      
  Fly   131 IITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGG 195

  Fly   284 ---RTWQTINHANKIIAIIWLGSLVCMTPIAAFSQL--MPTSRPGLRKC---REQWPADSLNYER 340
               .|..|:..|    ..|||.:::|..|....|.|  :..:...:..|   .|:|   .:||.:
  Fly   196 GRRATRMTLATA----VSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEW---GINYAK 253

  Fly   341 AYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRA 405
            :..|...|....:||:.::..|:.|.                                       
  Fly   254 SMVLLHFLVYYAIPLVVIAVFYVLIA--------------------------------------- 279

  Fly   406 NGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSL 470
                                                                 |:.|.||||.  
  Fly   280 -----------------------------------------------------LHLMYSASVP-- 289

  Fly   471 RHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRR 535
                               ||.               ||.|....:||                 
  Fly   290 -------------------GEI---------------QGAVRQVRARR----------------- 303

  Fly   536 SNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVY-EYVGYTSISFLQLLAY-- 597
                     |..|..:.||::  |.||:.|.:|. .:.....||.. :|..:..:  |:::||  
  Fly   304 ---------KVAVTVLAFVVI--FGICFLPYHVF-FLWFYFWPTAQDDYNAFWHV--LRIVAYCM 354

  Fly   598 --SSSCCNPITYCFMNASFRRAF 618
              ::||.||:...|::.:||:.|
  Fly   355 SFANSCANPVALYFVSGAFRKHF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 91/460 (20%)
TM helix 1 178..202 CDD:410628 6/24 (25%)
TM helix 2 211..233 CDD:410628 7/21 (33%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 4/15 (27%)
TM helix 5 340..363 CDD:410628 4/22 (18%)
TM helix 6 549..571 CDD:410628 7/21 (33%)
TM helix 7 586..611 CDD:410628 8/28 (29%)
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 91/460 (20%)
TM helix 1 83..109 CDD:320593 6/25 (24%)
TM helix 2 116..142 CDD:320593 7/25 (28%)
TM helix 3 154..184 CDD:320593 13/29 (45%)
TM helix 4 201..221 CDD:320593 6/23 (26%)
TM helix 5 252..277 CDD:320593 5/24 (21%)
TM helix 6 300..330 CDD:320593 11/58 (19%)
TM helix 7 345..370 CDD:320593 8/26 (31%)

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