DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and CCHa2-R

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length:487 Identity:107/487 - (21%)
Similarity:176/487 - (36%) Gaps:114/487 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LPLAKEAAIHLNASNEISAVGDGVTITGTPGDLLNYSGLELD---LGLDLDLNLDMDLATTPSSS 151
            :.:.:..|..|..|:...|...|:..||        .|||.:   |.||:..|...|       .
  Fly     6 MDVGQTLAARLADSDGNGANDSGLLATG--------QGLEQEQEGLALDMGHNASAD-------G 55

  Fly   152 TLAPAVTVRTPGNRSVVRVSADVPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLN 216
            .:.|.|.|.......:|.|          .|:.|.:..|:||..:|:...::|.||.|.|.::|:
  Fly    56 GIVPYVPVLDRPETYIVTV----------LYTLIFIVGVLGNGTLVIIFFRHRSMRNIPNTYILS 110

  Fly   217 LAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPL 281
            ||::|:|:.:.|:||..:......:.|...:|::.:|.:..|:.||.:||.|:|.|||.||.:||
  Fly   111 LALADLLVILVCVPVATIVYTQESWPFERNMCRISEFFKDISIGVSVFTLTALSGERYCAIVNPL 175

  Fly   282 RSRTWQTINHANKIIAIIWLGSLVCMTPIAAFSQL------MPTSRPGLRKCREQWPADSLNYER 340
            |....:.:.....:  :||:.:::...|...||.:      ..|....:..|.   |.....|.:
  Fly   176 RKLQTKPLTVFTAV--MIWILAILLGMPSVLFSDIKSYPVFTATGNMTIEVCS---PFRDPEYAK 235

  Fly   341 AYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNE----------------------------- 376
            .......|...:|||..:...|:.:.:.|::|.||.                             
  Fly   236 FMVAGKALVYYLLPLSIIGALYIMMAKRLHMSARNMPGEQQSMQSRTQARARLHVARMVVAFVVV 300

  Fly   377 --------------------------------RAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSH 409
                                            |.:.|.:|......:..|....:|..|:    |
  Fly   301 FFICFFPYHVFELWYHFYPTAEEDFDEFWNVLRIVGFCTSFLNSCVNPVALYCVSGVFRQ----H 361

  Fly   410 CQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQ 474
            .......:..:..||.:.|..:....|.....|.||....||.....|       ||:....:..
  Fly   362 FNRYLCCICVKRQPHLRQHSTATGMMDNTSVMSMRRSTYVGGTAGNLR-------ASLHRNSNHG 419

  Fly   475 INGGGGTLSGTGAGNGECCSRVHRMRQQMQLQ 506
            :.|.||.:.| |.|:|...| .|| :..|.||
  Fly   420 VGGAGGGVGG-GVGSGRVGS-FHR-QDSMPLQ 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 87/397 (22%)
TM helix 1 178..202 CDD:410628 6/23 (26%)
TM helix 2 211..233 CDD:410628 9/21 (43%)
TM helix 3 249..271 CDD:410628 7/21 (33%)
TM helix 4 294..310 CDD:410628 2/15 (13%)
TM helix 5 340..363 CDD:410628 4/22 (18%)
TM helix 6 549..571 CDD:410628
TM helix 7 586..611 CDD:410628
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593 63/310 (20%)
TM helix 1 71..97 CDD:320593 8/35 (23%)
TM helix 2 104..130 CDD:320593 9/25 (36%)
TM helix 3 142..172 CDD:320593 13/29 (45%)
TM helix 4 182..202 CDD:320593 2/21 (10%)
TM helix 5 234..259 CDD:320593 5/24 (21%)
TM helix 6 285..315 CDD:320593 0/29 (0%)
TM helix 7 330..355 CDD:320593 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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