DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and npy4r

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_571515.1 Gene:npy4r / 30717 ZFINID:ZDB-GENE-980526-393 Length:377 Species:Danio rerio


Alignment Length:506 Identity:125/506 - (24%)
Similarity:177/506 - (34%) Gaps:207/506 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 DMDLATTPSSSTLAPAVTVRTPGNRSVVRVSADVPIW--------VVPCYSAILLCAVVGNLLVV 197
            ||.|.....:|||     .....|.|:..:  |||.|        :|.||..:|:..::||:|::
Zfish     7 DMPLWQALLNSTL-----THNQSNSSLFLL--DVPCWQSSTMTLTLVLCYCLVLILGLLGNILLI 64

  Fly   198 LTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVS 262
            ..::..|....:|::.:.||::||||:.|||:|.|:|.||:.|:|||.|||:|:.|.|..||.||
Zfish    65 CIIMHQRDPPNVTSILIANLSVSDILVSVFCLPFTVVYTLMDHWIFGALLCRLMPFVQCVSVTVS 129

  Fly   263 SWTLVAISCERYYAICHPLRSRTWQ-TINHANKIIAIIWLGSLVCMT--PIAAFS-------QLM 317
            ..:||.|:.||:..|.||   ..|: ::..|...:..:||  |.|:|  |..||.       .|.
Zfish   130 VLSLVLIALERHQLILHP---SGWKPSVPQAYIAVLTVWL--LACVTSLPFLAFHLLTSEPYSLF 189

  Fly   318 PTSRPGLRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFG 382
            |.....|:.|.|.||  |.:::.||...|.|.....|||.:...||.|...|             
Zfish   190 PAPLSQLQVCLEVWP--SQDHKLAYTTSLLLFQYCCPLLLMLLCYLRIFLRL------------- 239

  Fly   383 SSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLI 447
                               |||.                                          
Zfish   240 -------------------QRRE------------------------------------------ 243

  Fly   448 SGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVS 512
                                :.|..|                   |||                 
Zfish   244 --------------------RMLERQ-------------------CSR----------------- 252

  Fly   513 DNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMT---- 573
                                 .|.:|.:.:...||:..||..||..|.:||.||...|.:.    
Zfish   253 ---------------------NREDEHRRVMHSKRINVMLATLVAAFAVCWLPLNAFNVVADCDQ 296

  Fly   574 --------MLLGPTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRR 616
                    .||            .|...|||.||:|.|||.|.|:|::||:
Zfish   297 EVLPVCNHNLL------------FSLCHLLAMSSTCVNPIIYGFLNSNFRK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 114/470 (24%)
TM helix 1 178..202 CDD:410628 7/23 (30%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 10/21 (48%)
TM helix 4 294..310 CDD:410628 5/17 (29%)
TM helix 5 340..363 CDD:410628 7/22 (32%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 12/24 (50%)
npy4rNP_571515.1 7tm_GPCRs 43..337 CDD:475119 113/463 (24%)
TM helix 1 45..69 CDD:320519 7/23 (30%)
TM helix 2 78..100 CDD:320519 10/21 (48%)
TM helix 3 116..138 CDD:320519 10/21 (48%)
TM helix 4 159..175 CDD:320519 5/17 (29%)
TM helix 5 210..233 CDD:320519 7/22 (32%)
TM helix 6 268..290 CDD:320519 9/21 (43%)
TM helix 7 305..330 CDD:320519 14/36 (39%)

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