DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Brs3

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_690058.1 Gene:Brs3 / 260319 RGDID:628645 Length:399 Species:Rattus norvegicus


Alignment Length:549 Identity:107/549 - (19%)
Similarity:185/549 - (33%) Gaps:211/549 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 TTPSSSTLAPAVTVR------TPGNRSVVRVSADVPIWVVPCYSAILLCAVVGNLLVVLTLVQNR 204
            |..|||.::...|.:      :||      :.|...|::.  |:.|:...::||.:::....:.:
  Rat    20 TETSSSAVSNDTTPKGWTGDNSPG------IEALCAIYIT--YAVIISVGILGNAILIKVFFKTK 76

  Fly   205 RMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVAI 269
            .|:|:.|:|:.:||..|:||.:.|:||.....|...::||::.||::.|.:..||.||.:||..:
  Rat    77 SMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGKVGCKVLSFIRLTSVGVSVFTLTIL 141

  Fly   270 SCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIAAFSQLM----PTSRPGLRKCREQ 330
            |.:||.|:..||..:....|.........||:.:::...|.|.||.:.    |........| ..
  Rat   142 SADRYKAVVKPLERQPSNAILKTCAKAGGIWIMAMIFALPEAIFSNVYTFQDPNRNVTFESC-NS 205

  Fly   331 WPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSSGPEVTTSSSAA 395
            :|......:..::|...|...::||..:|..|..|.||||.|..|                    
  Rat   206 YPISERLLQEIHSLLCFLVFYIIPLSIISVYYSLIARTLYKSTLN-------------------- 250

  Fly   396 VAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLY 460
                                 :|.:...|.:                                  
  Rat   251 ---------------------IPTEEQSHAR---------------------------------- 260

  Fly   461 CMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDNESRRKSLSQPS 525
                                                                             
  Rat   261 ----------------------------------------------------------------- 260

  Fly   526 LRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTP---LYVINTMTMLLGPTVYEYVGYT 587
                          |.:||:||:.|.:.|||..|.:||.|   ||:.::.|         |..|.
  Rat   261 --------------KQIESRKRIAKTVLVLVALFALCWLPNHLLYLYHSFT---------YESYA 302

  Fly   588 SIS--------FLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCCFWRRRSK- 643
            ..|        |.::||:|:||.||....:::.:|::.|....            |||...:.: 
  Rat   303 EPSDVPFVVTIFSRVLAFSNSCVNPFALYWLSKTFQKHFKAQL------------CCFKAEQPEP 355

  Fly   644 --NET---NLSVAGNSIALANSVMSSHTI 667
              .:|   ||:|.|...|..::.:|..::
  Rat   356 PLGDTPLNNLTVMGRVPATGSAHVSEISV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 87/455 (19%)
TM helix 1 178..202 CDD:410628 4/23 (17%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 2/15 (13%)
TM helix 5 340..363 CDD:410628 5/22 (23%)
TM helix 6 549..571 CDD:410628 10/24 (42%)
TM helix 7 586..611 CDD:410628 10/32 (31%)
Brs3NP_690058.1 7tm_GPCRs 48..341 CDD:475119 88/458 (19%)
TM helix 1 50..74 CDD:320251 5/25 (20%)
TM helix 2 83..105 CDD:320251 10/21 (48%)
TM helix 3 121..143 CDD:320251 8/21 (38%)
TM helix 4 166..182 CDD:320251 2/15 (13%)
TM helix 5 215..238 CDD:320251 5/22 (23%)
TM helix 6 270..292 CDD:320251 9/21 (43%)
TM helix 7 309..334 CDD:320251 8/24 (33%)

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