DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Hcrtr1

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_037196.1 Gene:Hcrtr1 / 25593 RGDID:2787 Length:416 Species:Rattus norvegicus


Alignment Length:548 Identity:131/548 - (23%)
Similarity:209/548 - (38%) Gaps:185/548 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 TPGNRSVVRVSADVPI-------------------------WV-VPCYSAILLCAVVGNLLVVLT 199
            |||.:..|..|:..|.                         || :..|.|:.|.|:|||.||.|.
  Rat     6 TPGAQPGVPTSSGEPFHLPPDYEDEFLRYLWRDYLYPKQYEWVLIAAYVAVFLIALVGNTLVCLA 70

  Fly   200 LVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSW 264
            :.:|..|||:||.|::||:::|:|:...|:|.:|:..:...::||..|||:|.:.||.||:|:..
  Rat    71 VWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCKVIPYLQAVSVSVAVL 135

  Fly   265 TLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIAAF---SQLMP--TSRPGL 324
            ||..|:.:|:|||||||..::  |...|...|..||..||..|.|.||.   |.::|  .:|..|
  Rat   136 TLSFIALDRWYAICHPLLFKS--TARRARGSILGIWAVSLAVMVPQAAVMECSSVLPELANRTRL 198

  Fly   325 -RKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSSGPEV 388
             ..|.|:| ||.| |.:.|:........:.||..:...|..|.|.|:              ||::
  Rat   199 FSVCDERW-ADEL-YPKIYHSCFFFVTYLAPLGLMGMAYFQIFRKLW--------------GPQI 247

  Fly   389 TTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPC 453
            ..::||.|                                                         
  Rat   248 PGTTSALV--------------------------------------------------------- 255

  Fly   454 EGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDNESRR 518
                             |:.:                       |..:|::.|.||..::.:.|.
  Rat   256 -----------------RNWK-----------------------RPSEQLEAQHQGLCTEPQPRA 280

  Fly   519 KSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVYEY 583
            ::...              |.|.:.::::..|||.|::|.|.:|:.|:.|:|.:..:.|  ::..
  Rat   281 RAFLA--------------EVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKRVFG--MFRQ 329

  Fly   584 VG-----YTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCC---FWRR 640
            ..     |...:|...|.|::|..|||.|.|::..||..|...|.           ||   ....
  Rat   330 ASDREAVYACFTFSHWLVYANSAANPIIYNFLSGKFREQFKAAFS-----------CCLPGLGPS 383

  Fly   641 RSKNETNLSVAGNSIALANSVMSSHTIL 668
            .|....:||:...   .:.|.:|.|.:|
  Rat   384 SSARHKSLSLQSR---CSVSKVSEHVVL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 114/452 (25%)
TM helix 1 178..202 CDD:410628 11/24 (46%)
TM helix 2 211..233 CDD:410628 8/21 (38%)
TM helix 3 249..271 CDD:410628 10/21 (48%)
TM helix 4 294..310 CDD:410628 6/15 (40%)
TM helix 5 340..363 CDD:410628 3/22 (14%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 10/24 (42%)
Hcrtr1NP_037196.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 6/15 (40%)
Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43613 26..41 0/14 (0%)
7tmA_OXR 47..369 CDD:320336 114/452 (25%)
TM helix 1 48..74 CDD:320336 11/25 (44%)
TM helix 2 81..107 CDD:320336 10/25 (40%)
TM helix 3 119..149 CDD:320336 14/29 (48%)
TM helix 4 160..181 CDD:320336 8/20 (40%)
TM helix 5 212..241 CDD:320336 5/28 (18%)
TM helix 6 291..321 CDD:320336 10/29 (34%)
TM helix 7 337..362 CDD:320336 10/24 (42%)

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