DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Tacr2

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_542946.1 Gene:Tacr2 / 25007 RGDID:3812 Length:390 Species:Rattus norvegicus


Alignment Length:501 Identity:116/501 - (23%)
Similarity:175/501 - (34%) Gaps:192/501 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 IWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRH 240
            :|.. .|.|::|.||.||..|:..::.:.||||:||.|::|||::|:.:..|......:......
  Rat    35 LWAT-AYLALVLVAVTGNATVIWIILAHERMRTVTNYFIINLALADLCMAAFNATFNFIYASHNI 98

  Fly   241 FIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLV 305
            :.||...|.........::.||.:::.||:.:||.||.||.:.|.  :......|||.|||.:|.
  Rat    99 WYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQPRL--SAPSTKAIIAGIWLVALA 161

  Fly   306 CMTPIAAFSQLMPTSRPGLRKCREQWPADSLNYER---AYNLFLDLALLVLPLLALSFTYLFITR 367
            ..:|...:|.:  |...|..||...||.|  |..:   .|:|.:.:.:..||||.:...|..|..
  Rat   162 LASPQCFYSTI--TVDEGATKCVVAWPND--NGGKMLLLYHLVVFVLIYFLPLLVMFGAYSVIGL 222

  Fly   368 TLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQ 432
            ||:                                :||           ||.    ||.|     
  Rat   223 TLW--------------------------------KRA-----------VPR----HQAH----- 235

  Fly   433 YYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVH 497
                    |:                          :|||                         
  Rat   236 --------GA--------------------------NLRH------------------------- 241

  Fly   498 RMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFIC 562
                                                        |::||:.||.:.::||.|.||
  Rat   242 --------------------------------------------LQAKKKFVKAMVLVVLTFAIC 262

  Fly   563 WTPLYVINTMTMLLGPTVYEYVGYTSISFLQ-------LLAYSSSCCNPITYCFMNASFRRAFVD 620
            |.|.:    :..:|| |..|.:.|.  .|:|       .||.||:..|||.||.:|..||..|  
  Rat   263 WLPYH----LYFILG-TFQEDIYYH--KFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGF-- 318

  Fly   621 TFKGMRVCERLCAPCCFWRRRSKNETNLSVAGNSIALANSVMSSHT 666
                     ||...||.|...:: |..|.:. ::.:|:..|...||
  Rat   319 ---------RLAFRCCPWVTPTE-EDRLELT-HTPSLSRRVNRCHT 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 104/450 (23%)
TM helix 1 178..202 CDD:410628 8/23 (35%)
TM helix 2 211..233 CDD:410628 7/21 (33%)
TM helix 3 249..271 CDD:410628 4/21 (19%)
TM helix 4 294..310 CDD:410628 7/15 (47%)
TM helix 5 340..363 CDD:410628 6/25 (24%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 12/31 (39%)
Tacr2NP_542946.1 7tmA_SKR_NK2R 34..318 CDD:320670 104/451 (23%)
TM helix 1 35..61 CDD:320670 9/26 (35%)
TM helix 2 68..94 CDD:320670 8/25 (32%)
TM helix 3 106..136 CDD:320670 8/29 (28%)
TM helix 4 147..168 CDD:320670 8/20 (40%)
TM helix 5 194..223 CDD:320670 8/28 (29%)
TM helix 6 243..273 CDD:320670 11/33 (33%)
TM helix 7 286..311 CDD:320670 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 365..390
Blue background indicates that the domain is not in the aligned region.

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