DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Cckar

DIOPT Version :9

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_036820.1 Gene:Cckar / 24889 RGDID:2289 Length:444 Species:Rattus norvegicus


Alignment Length:458 Identity:146/458 - (31%)
Similarity:216/458 - (47%) Gaps:119/458 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 YSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGEL 246
            ||.|.|.:|:||.||:..|::|:||||:||:|||:||:||::|.:||||..|:..||:.||||..
  Rat    63 YSIIFLLSVLGNTLVITVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFNLIPNLLKDFIFGSA 127

  Fly   247 LCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIA 311
            :||...:....||:||::.|||||.|||.|||.||:||.|||.:||.|:||..|..|...|||..
  Rat   128 VCKTTTYFMGTSVSVSTFNLVAISLERYGAICRPLQSRVWQTKSHALKVIAATWCLSFTIMTPYP 192

  Fly   312 AFSQLMPTSRPG---LRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSM 373
            .:|.|:|.::..   ...||...|:|::  ::::..||.|.|.:||.:.:...|..|:..||..:
  Rat   193 IYSNLVPFTKNNNQTANMCRFLLPSDAM--QQSWQTFLLLILFLLPGIVMVVAYGLISLELYQGI 255

  Fly   374 RNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYG 438
            :.:.:....:...:.:|.||..                                      |.|..
  Rat   256 KFDASQKKSAKEKKPSTGSSTR--------------------------------------YEDSD 282

  Fly   439 HCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQM 503
            .|                   |..:|...:.|..||::.|.|.            ||::|     
  Rat   283 GC-------------------YLQKSRPPRKLELQQLSSGSGG------------SRLNR----- 311

  Fly   504 QLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYV 568
                                         :|.|:...:|.:||||::||.|:|:.||:||.|::.
  Rat   312 -----------------------------IRSSSSAANLIAKKRVIRMLIVIVVLFFLCWMPIFS 347

  Fly   569 INTMTMLLGPTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCA 633
            .|........:..:::..|.|||:.||:|:|||.|||.|||||..||..|:.||           
  Rat   348 ANAWRAYDTVSAEKHLSGTPISFILLLSYTSSCVNPIIYCFMNKRFRLGFMATF----------- 401

  Fly   634 PCC 636
            |||
  Rat   402 PCC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_4 185..>308 CDD:304433 65/122 (53%)
7tm_1 192..>380 CDD:278431 82/190 (43%)
CckarNP_036820.1 CholecysA-Rec_N 16..62 CDD:401222
7tm_GPCRs 57..397 CDD:421689 140/438 (32%)
TM helix 1 58..84 CDD:410628 10/20 (50%)
TM helix 2 91..117 CDD:410628 15/25 (60%)
TM helix 3 129..159 CDD:410628 15/29 (52%)
TM helix 4 172..193 CDD:410628 10/20 (50%)
TM helix 5 221..250 CDD:410628 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..288 7/81 (9%)
TM helix 6 322..352 CDD:410628 14/29 (48%)
TM helix 7 365..390 CDD:410628 16/24 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341009
Domainoid 1 1.000 230 1.000 Domainoid score I2362
eggNOG 1 0.900 - - E33208_3BDYY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 259 1.000 Inparanoid score I3045
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042780at2759
OrthoFinder 1 1.000 - - FOG0001992
OrthoInspector 1 1.000 - - mtm9149
orthoMCL 1 0.900 - - OOG6_105354
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1306
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.660

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