DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and Tacr3

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_058749.1 Gene:Tacr3 / 24808 RGDID:3810 Length:452 Species:Rattus norvegicus


Alignment Length:578 Identity:128/578 - (22%)
Similarity:197/578 - (34%) Gaps:204/578 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 DGVTITGT-PGDLLNYSGLELDLGLDLDLNLDMDLATTPSSSTLAPAVT-----VRTPGNRSVVR 169
            ||....|| .|:|.:..|:...|.|.         |...||:...||.|     ||.......|:
  Rat    12 DGTVEVGTHTGNLSSALGVTEWLALQ---------AGNFSSALGLPATTQAPSQVRANLTNQFVQ 67

  Fly   170 VSADVPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLV 234
            .|..:.:|.: .|..::..||.|||:|:..::.::||||:||.||:|||.||..:..|...:..:
  Rat    68 PSWRIALWSL-AYGLVVAVAVFGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASVAAFNTLINFI 131

  Fly   235 GTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKI-IAI 298
            ..|...:.||...|:...|....:|..|.:::.||:.:||.||..||:.|...|   |.|| |..
  Rat   132 YGLHSEWYFGANYCRFQNFFPITAVFASIYSMTAIAVDRYMAIIDPLKPRLSAT---ATKIVIGS 193

  Fly   299 IWLGSLVCMTPIAAFSQLMPTSRPGLRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYL 363
            ||:.:.:...|...:|::  ...||...|..||| :.......|::.:.:.:...|||.:..||.
  Rat   194 IWILAFLLAFPQCLYSKI--KVMPGRTLCYVQWP-EGPKQHFTYHIIVIILVYCFPLLIMGVTYT 255

  Fly   364 FITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHH 428
            .:..||:                                                          
  Rat   256 IVGITLW---------------------------------------------------------- 262

  Fly   429 HHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECC 493
                                                              ||.:.      |:.|
  Rat   263 --------------------------------------------------GGEIP------GDTC 271

  Fly   494 SRVHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLE 558
            .:.|                                          :.|::|::||||:.::|:.
  Rat   272 DKYH------------------------------------------EQLKAKRKVVKMMIIVVVT 294

  Fly   559 FFICWTPLYVINTMTMLLGPTVYEYVG---YTSISFLQ--LLAYSSSCCNPITYCFMNASFRRAF 618
            |.|||.|.:|...:|     .:|:.:.   |....:|.  .||.||:..|||.||.:|..||..|
  Rat   295 FAICWLPYHVYFILT-----AIYQQLNRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFRAGF 354

  Fly   619 VDTFKGMRVCERLCAPCCFWRRRSKNETNLSV-----AGNSIALANSVMSSHTILESP 671
            ...|:.          |.|.:..|.:|..|..     ...|.....|.|.|.|:|..|
  Rat   355 KRAFRW----------CPFIQVSSYDELELKTTRFHPTRQSSLYTVSRMESVTVLFDP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 95/446 (21%)
TM helix 1 178..202 CDD:410628 7/23 (30%)
TM helix 2 211..233 CDD:410628 9/21 (43%)
TM helix 3 249..271 CDD:410628 5/21 (24%)
TM helix 4 294..310 CDD:410628 5/16 (31%)
TM helix 5 340..363 CDD:410628 5/22 (23%)
TM helix 6 549..571 CDD:410628 10/21 (48%)
TM helix 7 586..611 CDD:410628 11/26 (42%)
Tacr3NP_058749.1 7tmA_NKR_NK3R 73..354 CDD:320669 95/448 (21%)
TM helix 1 74..100 CDD:320669 8/26 (31%)
TM helix 2 107..133 CDD:320669 10/25 (40%)
TM helix 3 145..175 CDD:320669 9/29 (31%)
TM helix 4 186..207 CDD:320669 7/20 (35%)
TM helix 5 231..260 CDD:320669 6/28 (21%)
TM helix 6 279..309 CDD:320669 12/29 (41%)
TM helix 7 322..347 CDD:320669 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..452 1/3 (33%)

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