DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and npr-6

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_509725.2 Gene:npr-6 / 185623 WormBaseID:WBGene00009619 Length:402 Species:Caenorhabditis elegans


Alignment Length:518 Identity:113/518 - (21%)
Similarity:181/518 - (34%) Gaps:213/518 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 SSTLAPAVT----VRTPGNRSVVRVSADVPI-------WVVPCYSAILLCAVVGNLLVVLTLVQN 203
            |:.|.|:|:    ..||..:|..::..: |:       :.:..|.|:.|.|..||.|||..::.|
 Worm     2 SNDLVPSVSSILNETTPSYQSTCKIKNN-PMEMEYFRPFFISMYCAVFLVASSGNFLVVYVVMTN 65

  Fly   204 RRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQAASVAVSSWTLVA 268
            :||:||||:|:.|||:|||::....:.:|...|.:.|:|||..||..:...|..|:.:|:|||.|
 Worm    66 KRMQTITNIFITNLAVSDIMVNFTSLWLTPTYTSIGHWIFGGGLCHGLPLFQGTSIFISTWTLTA 130

  Fly   269 ISCERYYAICHPLRSRTWQTINHAN-------------KIIAIIWLGSLVCMTPIAAFSQLMPTS 320
            |:.:||..|.|          |.:|             ..|.:|||.||:.:||.|...:|....
 Worm   131 IAIDRYIVIVH----------NSSNININDRMSMRSCLSFIVLIWLCSLLLVTPYAINMKLNYIH 185

  Fly   321 RP-GLRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSS 384
            .| ....|.|.|  .:..:...:.:.:.:...:||.:.::.:|:.|  .|:::.|          
 Worm   186 EPCDFLICSEDW--SNAEFRSIFGIVVMILQFILPFVLIAISYIKI--WLFLNSR---------- 236

  Fly   385 GPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISG 449
                                      ||:                                    
 Worm   237 --------------------------QSM------------------------------------ 239

  Fly   450 GGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDN 514
                                                                             
 Worm   240 ----------------------------------------------------------------- 239

  Fly   515 ESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPT 579
             :.|||                    .::.|||:::||.|:|:.|.|||.|..::|.:..|....
 Worm   240 -TERKS--------------------DIKRKKRLLRMLIVMVVIFAICWFPFNLLNCLRDLKLDN 283

  Fly   580 VYEYVGYTSISFL--QLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCCFWRR 640
            ...  ||.|..||  .|::.:::..|||.|.|||.:||..|...           .||.|.||
 Worm   284 FMR--GYFSFVFLSVHLMSMTATAWNPILYAFMNETFREEFAKV-----------VPCLFARR 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 99/456 (22%)
TM helix 1 178..202 CDD:410628 9/23 (39%)
TM helix 2 211..233 CDD:410628 8/21 (38%)
TM helix 3 249..271 CDD:410628 8/21 (38%)
TM helix 4 294..310 CDD:410628 7/15 (47%)
TM helix 5 340..363 CDD:410628 2/22 (9%)
TM helix 6 549..571 CDD:410628 9/21 (43%)
TM helix 7 586..611 CDD:410628 10/26 (38%)
npr-6NP_509725.2 7tmA_NPYR-like 39..322 CDD:320331 99/456 (22%)
TM helix 1 39..65 CDD:320331 9/25 (36%)
TM helix 2 72..97 CDD:320331 10/24 (42%)
TM helix 3 110..140 CDD:320331 11/29 (38%)
TM helix 4 156..177 CDD:320331 8/20 (40%)
TM helix 5 203..232 CDD:320331 4/30 (13%)
TM helix 6 247..277 CDD:320331 13/29 (45%)
TM helix 7 290..315 CDD:320331 9/24 (38%)

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