DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and npr-33

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_510612.1 Gene:npr-33 / 185141 WormBaseID:WBGene00009278 Length:399 Species:Caenorhabditis elegans


Alignment Length:456 Identity:92/456 - (20%)
Similarity:156/456 - (34%) Gaps:172/456 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 ILLCA-VVGNLLVVLTLVQNRR-MRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELL 247
            |::|| |:||:.:|..::.:|: |.:..|.|||||||:|:...:||.|..::..:.|.::.....
 Worm    68 IIICAGVIGNIFIVFVILMDRKLMSSSVNQFLLNLAIADLGNLIFCSPDAILVLIDRGWLLPNFA 132

  Fly   248 CKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIAA 312
            |.|::|.|...:..|....:||..||:.|||.|:|.:.:.| .....::|.:|..:....:|...
 Worm   133 CHLLRFLQEYFLYASVLLQMAIGVERFLAICSPMRMQRFST-KTTISVLAGVWCVAACFASPYFL 196

  Fly   313 FSQLMPTSRPGLRKCREQWPADSLNYERAYNLFLDLALL-VLPLLALSFTYLFITRTLYVSMRNE 376
            :..::...   |..|  .|...| :..|.|..:.:|.:| .:||:.|:..|..:.|.|:.:..|.
 Worm   197 YQGIVFHK---LYFC--FWKGIS-HKTRTYFKYCELIVLYAIPLVFLTTLYSIMCRVLWGNEDNH 255

  Fly   377 RAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCG 441
            ...|                                                 |||         
 Worm   256 NIAN-------------------------------------------------HSQ--------- 262

  Fly   442 SKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQ 506
                                 :.|.:|                                      
 Worm   263 ---------------------QEAILK-------------------------------------- 268

  Fly   507 QQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINT 571
                                      ||||           |||||.:.:|.:|:|:||:.|:..
 Worm   269 --------------------------LRRS-----------VVKMLIISMLLYFLCYTPIQVLFM 296

  Fly   572 MTMLLGPTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCC 636
            :..:|..:| :...:..: .|.:|:..||..|||.|......||....|...|      :.:.||
 Worm   297 LEKILDHSV-QLPQWLRL-LLNVLSVMSSSTNPIVYIICCRHFRLRLRDVAAG------ISSFCC 353

  Fly   637 F 637
            :
 Worm   354 W 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 88/435 (20%)
TM helix 1 178..202 CDD:410628 7/17 (41%)
TM helix 2 211..233 CDD:410628 12/21 (57%)
TM helix 3 249..271 CDD:410628 6/21 (29%)
TM helix 4 294..310 CDD:410628 2/15 (13%)
TM helix 5 340..363 CDD:410628 7/23 (30%)
TM helix 6 549..571 CDD:410628 10/21 (48%)
TM helix 7 586..611 CDD:410628 8/24 (33%)
npr-33NP_510612.1 7tm_classA_rhodopsin-like 62..334 CDD:410626 86/428 (20%)
TM helix 1 62..87 CDD:410626 7/18 (39%)
TM helix 2 94..121 CDD:410626 12/26 (46%)
TM helix 3 133..163 CDD:410626 10/29 (34%)
TM helix 4 175..194 CDD:410626 2/18 (11%)
TM helix 5 218..243 CDD:410626 8/24 (33%)
TM helix 6 268..298 CDD:410626 16/104 (15%)
TM helix 7 309..334 CDD:410626 8/25 (32%)

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