DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and ckr-2

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001367973.1 Gene:ckr-2 / 175341 WormBaseID:WBGene00021439 Length:603 Species:Caenorhabditis elegans


Alignment Length:567 Identity:164/567 - (28%)
Similarity:258/567 - (45%) Gaps:116/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DLLNYSGLELDLGLDLDLNLDMDLATTPS-----SSTLAPAVTVRTPGNRSVVRVSADVPIWVVP 180
            ::.||..:.....|:| ||     ||:|.     :|.|  :.|:.|.....:.|.......:.:.
 Worm     8 NITNYDTMNSSSFLEL-LN-----ATSPPPIWTLNSNL--STTMSTVHQEEICRFRGTTENYTIA 64

  Fly   181 -CYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFG 244
             .:..|.|.:||||.:|::.:::.|.||:|||::|:|||.||::|.|.|||.|||..::..::||
 Worm    65 VTFFMIFLLSVVGNSVVLIVIIKQRAMRSITNIYLMNLAASDMMLSVVCMPPTLVSMVMNCWMFG 129

  Fly   245 ELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTP 309
            ..:||::.:.|...|..|::||..|:.|||:|||.||.||.|||.:||..:|.::|:.::.....
 Worm   130 NYMCKILAYLQPVVVTASAYTLAVIAFERYFAICKPLHSRIWQTRSHAYAMITLVWVIAIAANIL 194

  Fly   310 IAAFSQLMPTSRPGLRKCREQWPADSLNYERAYNLFLDLALLVLPLLALSFTYLFITRTLYVSMR 374
            :....:....|..|. .|.   |.....|..||.:::.:.|||:||:.::..|    ..:..|::
 Worm   195 MLFMYEQQTYSSNGY-TCA---PIHPPIYHFAYQVYMTVVLLVIPLVVMAGLY----GNVITSLK 251

  Fly   375 NERAMNFGSSGPEVTTSSSAAVAE----------------AGSQRRANGSHCQSLD--------- 414
            :...:...|..|.:.|:::.....                .||.:.|..:.|.:|:         
 Worm   252 SGIKLEIASVDPPLATATTTGAKNLGSHSDSAHLLLNNVLVGSSQLARATSCIALNTFSCNNTTN 316

  Fly   415 ---TIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGGGPCEG--RRHLYCM---RS------- 464
               |:.|..  |.||.:.            ||.:|:...|..:.  ...|.|:   ||       
 Worm   317 PFSTLTPPP--PIQQKNR------------SKPQLLQLPGKIDNFEEFRLQCLSDCRSDGVLFPP 367

  Fly   465 -ASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYV--SDNESRRKS-----L 521
             |.|.|:..:|                 ..|..:::..::...||...  ..|...|||     |
 Worm   368 PAIVASMTDEQ-----------------KLSFWNKLSNKLTFSQQDKTVQHPNFGHRKSDTSICL 415

  Fly   522 SQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVINTMTMLLGPTVYEY--- 583
            ..||||.|       :..||..:|:||:|||.|:|:.||.||||.| |..:.::.|.:....   
 Worm   416 ENPSLRST-------HTQKSAMAKQRVIKMLIVVVIIFFCCWTPSY-IWWLLLIAGDSFQSLNLS 472

  Fly   584 VGYTSI-SFLQLLAYSSSCCNPITYCFMNASFRRAFVDTF---KGMR 626
            |..:.| :|:.||.|.|||.|||||||:|..||.|...||   |.||
 Worm   473 VWNSDINTFITLLTYISSCTNPITYCFLNKKFRNAVYATFGRKKNMR 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 144/493 (29%)
TM helix 1 178..202 CDD:410628 7/24 (29%)
TM helix 2 211..233 CDD:410628 12/21 (57%)
TM helix 3 249..271 CDD:410628 7/21 (33%)
TM helix 4 294..310 CDD:410628 2/15 (13%)
TM helix 5 340..363 CDD:410628 7/22 (32%)
TM helix 6 549..571 CDD:410628 13/21 (62%)
TM helix 7 586..611 CDD:410628 15/25 (60%)
ckr-2NP_001367973.1 7tmA_CCKR-like 61..508 CDD:320124 144/493 (29%)
TM helix 1 62..88 CDD:320124 7/25 (28%)
TM helix 2 95..121 CDD:320124 16/25 (64%)
TM helix 3 133..163 CDD:320124 12/29 (41%)
TM helix 4 177..195 CDD:320124 3/17 (18%)
TM helix 5 220..245 CDD:320124 8/28 (29%)
TM helix 6 430..460 CDD:320124 16/30 (53%)
TM helix 7 476..501 CDD:320124 15/24 (63%)

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