DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and tacr3

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_002934808.1 Gene:tacr3 / 100486525 XenbaseID:XB-GENE-985728 Length:431 Species:Xenopus tropicalis


Alignment Length:555 Identity:116/555 - (20%)
Similarity:188/555 - (33%) Gaps:203/555 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LATTPSSSTLAPAVTVRTPGNRSVV-------RVSADV------PIWVVP----CYSAILLCAVV 191
            :.:.|::.|....:.:..|....|:       .||:.|      |.|.:.    .|.:::..||.
 Frog     1 MTSMPTNLTTGEVIGIFAPLGEGVLWPNSTQRNVSSPVAHKFVQPPWRIALWSLAYGSMVAVAVF 65

  Fly   192 GNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLLRHFIFGELLCKLIQFAQA 256
            ||::|:..::.::||||:||.||:|||.||..:..|...|..:..|...:.|||..|:...|...
 Frog    66 GNIIVIWIILAHKRMRTVTNYFLVNLAFSDASMAAFNTLVNFIYALHNEWYFGEAYCRFHNFFPI 130

  Fly   257 ASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGSLVCMTPIAAFSQLMPTSR 321
            .|:..|.:::.||:.:||.||..||:.|...|  ....:|..||:.:::...|...:|::..|..
 Frog   131 TSIFASIYSMSAIAVDRYMAIIDPLKPRLSAT--STKVVIGSIWIFAILLAFPQCLYSKIRVTRT 193

  Fly   322 PGLRKCREQWPADSLNYER-AYNLFLDLALLVLPLLALSFTYLFITRTLYVSMRNERAMNFGSSG 385
            ..|  |...||...   || .|...|.|.:.||||:.:..||..:..||:               
 Frog   194 RTL--CMLVWPGKD---ERLTYQFILVLLVYVLPLIVMGVTYTIVGITLW--------------- 238

  Fly   386 PEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHHSQYYYDYGHCGSKRRLISGG 450
                                                                             
 Frog   239 ----------------------------------------------------------------- 238

  Fly   451 GPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSRVHRMRQQMQLQQQGYVSDNE 515
                                        ||.:.      |:...:.|                  
 Frog   239 ----------------------------GGEIP------GDTSDKYH------------------ 251

  Fly   516 SRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFFICWTPLYVI---NTMTMLLG 577
                                    :.|.:|::||||:.|:|:.|.|||.|.::.   :.:.:.|.
 Frog   252 ------------------------EQLRAKRKVVKMMIVVVVTFAICWLPYHIFFLADALDIKLD 292

  Fly   578 PTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTFKGMRVCERLCAPCCFWRRRS 642
            ...|....|.:|.:   ||.||:..|||.||.:|..||..|...|:.          |.|....|
 Frog   293 RWKYIQQIYLAIFW---LAMSSTMYNPIIYCCLNKRFRAGFKRAFRW----------CPFIEVSS 344

  Fly   643 KNETNLS------VAGNSIALANSVMSSHTILESP 671
            .:|..|.      ...:|:...:.:.||.|::..|
 Frog   345 YDELELKSTRFHPTRQSSLYTVSRMESSMTVVFDP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 96/448 (21%)
TM helix 1 178..202 CDD:410628 6/27 (22%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 5/21 (24%)
TM helix 4 294..310 CDD:410628 3/15 (20%)
TM helix 5 340..363 CDD:410628 9/23 (39%)
TM helix 6 549..571 CDD:410628 10/24 (42%)
TM helix 7 586..611 CDD:410628 11/24 (46%)
tacr3XP_002934808.1 7tm_GPCRs 50..330 CDD:475119 95/445 (21%)
TM helix 1 52..76 CDD:320669 6/23 (26%)
TM helix 2 85..107 CDD:320669 10/21 (48%)
TM helix 3 123..145 CDD:320669 5/21 (24%)
TM helix 4 166..182 CDD:320669 3/15 (20%)
TM helix 5 208..231 CDD:320669 8/22 (36%)
TM helix 6 261..283 CDD:320669 10/21 (48%)
TM helix 7 298..323 CDD:320669 11/27 (41%)

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