DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and LOC100333270

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_002666594.1 Gene:LOC100333270 / 100333270 -ID:- Length:393 Species:Danio rerio


Alignment Length:484 Identity:104/484 - (21%)
Similarity:168/484 - (34%) Gaps:184/484 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 VPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLL 238
            |.:|.| .::.:||.||.|||:|:..:|.::||||:||.||||||:||:.:......|..|....
Zfish    23 VALWSV-AFALVLLVAVTGNLIVIWIIVAHKRMRTVTNYFLLNLAVSDVCVAALNALVNFVYGAH 86

  Fly   239 RHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGS 303
            .|:.|....|:...|...|:|..|.:::.||:.:||.||.||::.|....:..|  :|..:|:.:
Zfish    87 GHWYFSSAYCRFQNFYPVAAVFASIYSMSAIALDRYMAIIHPMKPRLSAKVTKA--VIVCVWILA 149

  Fly   304 LVCMTPIAAFSQLMPTSRPGLRKCREQWPA---DSLNYERAYNLFLDLALLVLPLLALSFTYLFI 365
            .....|:..:|  :....|....|...||.   |:.    .|::.:.|.:.:|||..::.||..:
Zfish   150 AFLSFPLCFYS--VTEVLPHRTVCYVAWPRKDDDAF----IYHVVVALLVYLLPLALMAVTYSRV 208

  Fly   366 TRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQHHHH 430
            ..||:           |...|                                            
Zfish   209 GLTLW-----------GGDFP-------------------------------------------- 218

  Fly   431 SQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGECCSR 495
                   ||                         :|...|.|                       
Zfish   219 -------GH-------------------------SSENLLDH----------------------- 228

  Fly   496 VHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVLEFF 560
                                                          |::|::||||:.::|:.|.
Zfish   229 ----------------------------------------------LQAKRKVVKMMVIVVVTFA 247

  Fly   561 ICWTP---LYVINTMTMLLGPTVYEYVGYTSISFLQLLAYSSSCCNPITYCFMNASFRRAFVDTF 622
            |||.|   .:::.:....|....:....|.|:.:|.:   |||..|||.||.:|:.||..|...|
Zfish   248 ICWLPYHVYFIVTSFNRALRRFKWIQQVYLSVLWLSM---SSSMYNPIIYCCLNSRFRAGFKRVF 309

  Fly   623 KGMRVCERLCAPCCFWRRRSKNETNLSVA 651
            :.          |.|.:..:.:|..|..|
Zfish   310 RW----------CPFIQMSNCDELELQTA 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 96/446 (22%)
TM helix 1 178..202 CDD:410628 9/23 (39%)
TM helix 2 211..233 CDD:410628 10/21 (48%)
TM helix 3 249..271 CDD:410628 6/21 (29%)
TM helix 4 294..310 CDD:410628 2/15 (13%)
TM helix 5 340..363 CDD:410628 6/22 (27%)
TM helix 6 549..571 CDD:410628 9/24 (38%)
TM helix 7 586..611 CDD:410628 11/24 (46%)
LOC100333270XP_002666594.1 7tm_GPCRs 24..305 CDD:475119 96/448 (21%)
TM helix 1 26..50 CDD:410628 10/24 (42%)
TM helix 2 59..81 CDD:410628 10/21 (48%)
TM helix 3 97..119 CDD:410628 6/21 (29%)
TM helix 4 140..156 CDD:410628 3/17 (18%)
TM helix 5 183..206 CDD:410628 6/26 (23%)
TM helix 6 236..258 CDD:410628 9/21 (43%)
TM helix 7 273..298 CDD:410628 11/27 (41%)

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