DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKLR-17D1 and tacr1a

DIOPT Version :10

Sequence 1:NP_001097021.1 Gene:CCKLR-17D1 / 32860 FlyBaseID:FBgn0259231 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001257407.1 Gene:tacr1a / 100003539 ZFINID:ZDB-GENE-060526-185 Length:426 Species:Danio rerio


Alignment Length:475 Identity:106/475 - (22%)
Similarity:171/475 - (36%) Gaps:194/475 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 VPIWVVPCYSAILLCAVVGNLLVVLTLVQNRRMRTITNVFLLNLAISDILLGVFCMPVTLVGTLL 238
            :.:|.| .||.|::.:||||:.|:..::.::||||:||.||:|||.::..:..|...:..|.::.
Zfish    38 IVLWAV-AYSTIVVVSVVGNITVIWIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINFVYSVH 101

  Fly   239 RHFIFGELLCKLIQFAQAASVAVSSWTLVAISCERYYAICHPLRSRTWQTINHANKIIAIIWLGS 303
            ..:.||...|:...|...|:|..|.:::.||:.:||.||.|||:.|  .:......:|.:||:.:
Zfish   102 NEWYFGLYYCRFHNFFPIAAVFASIYSMTAIALDRYMAIIHPLQQR--MSATQTKVVIGVIWILA 164

  Fly   304 LVCMTPIAAFS---QLMPTSRPGLRKCREQWPADS-LNYERAYNLFLDLALLV--LPLLALSFTY 362
            |:...|...:|   ||     ||...|...||..: |:::..|  |:.:|:|:  ||||.:...|
Zfish   165 LLLAFPQYYYSDTDQL-----PGRVVCYIDWPEYTLLDFKTMY--FVCVAVLIYFLPLLVMGCAY 222

  Fly   363 LFITRTLYVSMRNERAMNFGSSGPEVTTSSSAAVAEAGSQRRANGSHCQSLDTIVPHQHNPHQQH 427
            |.:..||:.|              |:...||.                                 
Zfish   223 LVVGLTLWAS--------------EIPGDSSD--------------------------------- 240

  Fly   428 HHHSQYYYDYGHCGSKRRLISGGGPCEGRRHLYCMRSASVKSLRHQQINGGGGTLSGTGAGNGEC 492
                                                       |:|:                  
Zfish   241 -------------------------------------------RYQE------------------ 244

  Fly   493 CSRVHRMRQQMQLQQQGYVSDNESRRKSLSQPSLRITEAGLRRSNETKSLESKKRVVKMLFVLVL 557
                                                            .|.:|::||||:.|:|.
Zfish   245 ------------------------------------------------QLTAKRKVVKMMIVVVC 261

  Fly   558 EFFICWTPLYVINTMTMLLGPTVYEYVGYTSISFLQ-------LLAYSSSCCNPITYCFMNASFR 615
            .|.:||.|.:|...:.... |.::|:      :|:|       .||.||:..|||.||.:|..||
Zfish   262 TFAVCWLPYHVYFLIHQFY-PHLFEH------TFIQQVYLTIMWLAMSSTMYNPIIYCCLNDRFR 319

  Fly   616 RAFVDTFKGMRVCERLCAPC 635
            ..|...|:        |.||
Zfish   320 AGFKQAFR--------CCPC 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKLR-17D1NP_001097021.1 7tm_GPCRs 177..618 CDD:475119 101/453 (22%)
TM helix 1 178..202 CDD:410628 9/23 (39%)
TM helix 2 211..233 CDD:410628 7/21 (33%)
TM helix 3 249..271 CDD:410628 6/21 (29%)
TM helix 4 294..310 CDD:410628 4/15 (27%)
TM helix 5 340..363 CDD:410628 8/24 (33%)
TM helix 6 549..571 CDD:410628 10/21 (48%)
TM helix 7 586..611 CDD:410628 11/31 (35%)
tacr1aNP_001257407.1 7tmA_NK1R 39..322 CDD:320668 101/455 (22%)
TM helix 1 40..66 CDD:320668 10/26 (38%)
TM helix 2 73..99 CDD:320668 9/25 (36%)
TM helix 3 111..141 CDD:320668 10/29 (34%)
TM helix 4 152..173 CDD:320668 5/20 (25%)
TM helix 5 199..228 CDD:320668 10/30 (33%)
TM helix 6 247..277 CDD:320668 12/29 (41%)
TM helix 7 290..315 CDD:320668 10/24 (42%)

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