DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp308a1 and Cyp3a18

DIOPT Version :9

Sequence 1:NP_573320.1 Gene:Cyp308a1 / 32859 FlyBaseID:FBgn0030949 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:540 Identity:126/540 - (23%)
Similarity:236/540 - (43%) Gaps:113/540 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LPLVLFILLAATLLFWKWQGNH----WRRLGLEAPFGWPLVGNMLDFALGR--------RSYGEI 54
            |.:..::|||.:|:.:...|.:    :::||:..|...||.|.:.::..|.        :.||:|
  Rat     7 LSIETWVLLATSLMLFYIYGTYSHGLFKKLGIPGPKPVPLFGTIFNYGDGMWKFDDDCYKKYGKI 71

  Fly    55 YQEIYTRNPGLKYVGFYRLFNEPAILVRDQELLRQILVGRNFADCADNAVYVDHQRDVLASHNPF 119
            :             |||. ..:|.:.:.|.|:::.:||    .:|  .:|:.:.:     ...|.
  Rat    72 W-------------GFYE-GPQPFLAIMDPEIIKMVLV----KEC--YSVFTNRR-----CFGPM 111

  Fly   120 --------IANGDRWRVLRADLVPLFTPSRVRQTLPHVAR-ACQLLRDQVPLGRFEA-------K 168
                    ::..:.|:.||..|.|.||..::::..|.:.: ...||::   |.|.||       |
  Rat   112 GFMKKAITMSEDEEWKRLRTILSPTFTSGKLKEMFPLMRQYGDTLLKN---LRREEAKGEPINMK 173

  Fly   169 DLATRYTLQVVASAIFGLDAHCLGIHM-RVAHEPSRWLEWLAPLFQPSVWSLLETMSLLHTPRLG 232
            |:...|::.|:....||::...|.... ....:..:.|::  .:|.|.:.|::....|  || :.
  Rat   174 DIFGAYSMDVITGTSFGVNVDSLNNPQDPFVQKAKKILKF--QIFDPFLLSVVLFPFL--TP-IY 233

  Fly   233 RLIGHRYVPLPLQHWFRELVEA---------RSGGDNLLQWL--------AESKRGLGKEELAGH 280
            .::.....|....::|::.|:.         :....:.||.:        .||::.|...|:|..
  Rat   234 EMLNFSIFPRQSMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNTQNSKGQESQKALSDLEMAAQ 298

  Fly   281 ATTLLLEGYETSAMLLAFALYELALNEDAQRRLHIELDEVAQRHAGNLIDPVALGELRYSEAALL 345
            |...:..||:.::..::|.:||||...:.|::|..|:|......|....|  ||.|:.|.:..:.
  Rat   299 AIIFIFGGYDATSTSISFIMYELATRPNVQKKLQNEIDRALPNKAPVTYD--ALMEMEYLDMVVN 361

  Fly   346 EALRLHPAMQALQKRCTKTFTLPDQKSGASSELK---VHLGTVLVLPVQAIHLDPALYPAPNQFR 407
            |:|||:|....|           |:.|....|:.   :..|||:.:|:..:|.:|..:..|.:|.
  Rat   362 ESLRLYPIATRL-----------DRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPEEFN 415

  Fly   408 PERFLNQ------PPMGCRFLGFGAGPRMCPGMRLGLLQTKAALTTLLQDHCVQLADEDQCRVEV 466
            ||||..:      |.:   :|.||.|||.|.|||..|:..|.|:..:||:..:|..::.|..:::
  Rat   416 PERFSKENKGSIDPYV---YLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQPCEKTQIPLKI 477

  Fly   467 S---------PLTFLTASRN 477
            |         |:.....||:
  Rat   478 SRQPIFQPEGPIILKLVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp308a1NP_573320.1 p450 32..481 CDD:299894 118/506 (23%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 111/473 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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