DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp308a1 and cyp3a4.1

DIOPT Version :9

Sequence 1:NP_573320.1 Gene:Cyp308a1 / 32859 FlyBaseID:FBgn0030949 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_002943949.2 Gene:cyp3a4.1 / 100494419 XenbaseID:XB-GENE-984218 Length:504 Species:Xenopus tropicalis


Alignment Length:542 Identity:135/542 - (24%)
Similarity:230/542 - (42%) Gaps:114/542 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVLFILLAATLLFWKWQGNHWRRLGLEAPFGWPLVGNMLDFALGRRSYG-EIYQEIYTRNPGLKY 67
            ::|.:||...||:..|....::::|:..|...|.:|..|:|..|...:. |.::: |.|..|: |
 Frog    13 ILLAVLLVLILLYGIWPYGLFKKMGIPGPTPLPFIGTFLEFRKGMIQFDIECFKK-YGRMWGM-Y 75

  Fly    68 VGFYRLFNEPAILVRDQELLRQILVGRNFADCADNAVYVDHQRDVLASHNPF-----IANGDRWR 127
            .|     .:|.:.:.|..:::.|||    .:|..|..    .|.....:.|.     :|..::|:
 Frog    76 DG-----RQPVLAIMDPAIIKTILV----KECYTNFT----NRRNFGLNGPLESAITVAEDEQWK 127

  Fly   128 VLRADLVPLFTPSRVRQTLPHVARACQLLRD---------QVPLGRFE---AKDLATRYTLQVVA 180
            .:|:.|.|.||..::::..       |:::|         ||.:.:.|   .||:...|::.|:.
 Frog   128 RIRSVLSPTFTSGKLKEMF-------QIMKDYSDILVKNVQVSVDKDEPCATKDVIGAYSMDVIT 185

  Fly   181 SAIFGLDAHCLG-------IHMRVAHEPSRWLEWLAP-----LFQPSVWSLLETMSLLHTPRLGR 233
            |..|.::...|.       ||::...:..    :|:|     :..|.:..:.|.:::        
 Frog   186 STSFSVNIDSLQNPSNPFVIHIKNLLKTG----FLSPVIIFAVIFPFLRPIFEVLNI-------- 238

  Fly   234 LIGHRYVPLPLQHWFRELV----EARSGGD-----NLLQWLAES-----------KRGLGKEELA 278
                .:.|.....:|...|    |.|..||     :|||.:.:|           .:.|...|:.
 Frog   239 ----SFFPKDFTQFFMNAVTSFREKRKKGDHSGRVDLLQLMVDSGTTEGNDSSNQHKALTDAEIM 299

  Fly   279 GHATTLLLEGYETSAMLLAFALYELALNEDAQRRLHIELDEVAQRHAGNLIDPVALGELRYSEAA 343
            ..:...:..||||::..|::..|.||.:.|.|::||.|:|......|....|  .|.::.|.:..
 Frog   300 AQSLIFIFAGYETTSTALSYLFYNLATHPDVQQKLHEEIDSFLPDKASPTYD--ILMQMEYLDMV 362

  Fly   344 LLEALRLHPAMQALQKRCTKTFTLPDQKSGASSELKVHLGTVLVLPVQAIHLDPALYPAPNQFRP 408
            :.|.|||.|....|::...:...:    :|.|    :..|||.::|...:..||..:|.|.:|||
 Frog   363 IQETLRLFPPAGRLERVSKQNVEI----NGVS----IPKGTVAMIPAYVLQRDPEYWPEPEEFRP 419

  Fly   409 ERF-----LNQPPMGCRFLGFGAGPRMCPGMRLGLLQTKAALTTLLQDHCVQLADEDQCRVEVSP 468
            |||     ..|.|.  .||.||.|||.|.|:|..||..|.|:.||||:..|:     .|...:.|
 Frog   420 ERFSKENRATQTPF--TFLPFGDGPRNCIGLRFALLSMKVAIATLLQNFSVR-----PCAETLIP 477

  Fly   469 LTFLTAS----RNGIWLSFKRR 486
            :.|.|..    :..|.|.|..|
 Frog   478 MEFSTIGVLQPKKPIVLKFLSR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp308a1NP_573320.1 p450 32..481 CDD:299894 125/507 (25%)
cyp3a4.1XP_002943949.2 p450 39..496 CDD:365848 126/511 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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