DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp18a1 and Cyp2c23

DIOPT Version :9

Sequence 1:NP_523403.2 Gene:Cyp18a1 / 32858 FlyBaseID:FBgn0010383 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_114027.2 Gene:Cyp2c23 / 83790 RGDID:620370 Length:494 Species:Rattus norvegicus


Alignment Length:502 Identity:166/502 - (33%)
Similarity:280/502 - (55%) Gaps:28/502 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LGLLALVTLLQWLVRNYRELR---KLPPGPWGLPVIGYLLFMG-SEKHTRFMELAKQYGSLFSTR 91
            |.|:..||.|. |:..:.:||   :|||||..||:||.||.:. .:......:|||:||.:::..
  Rat     9 LALVVSVTCLS-LLSVWTKLRTRGRLPPGPTPLPIIGNLLQLNLKDIPASLSKLAKEYGPVYTLY 72

  Fly    92 LGSQLTVVMSDYKMIRECF--RREEFTGRPDTPFMQ-TLNGYGIINSTGKLWKDQRRFLHDKLRQ 153
            .|:..|||:..|.:::|..  :.:||.||...|.:: |..|||:|.|.|:.||..|||....||.
  Rat    73 FGTSPTVVLHGYDVVKEALLQQGDEFLGRGPLPIIEDTHKGYGLIFSNGERWKVMRRFSLMTLRN 137

  Fly   154 FGMTYMGNGKQQMQKRIMTEVHEFIGHLHASDGQPVDMSPVISVAVSNVICSLMMSTRFSIDDPK 218
            |||     ||:.:::|:..|....:..|..:..||.|.:.:::.|..|||||::.:.||..::..
  Rat   138 FGM-----GKRSLEERVQEEARCLVEELQKTKAQPFDPTFILACAPCNVICSILFNDRFQYNNKT 197

  Fly   219 FRRFNFLIEEGMRLFGEIHTVDYIPTMQCFPSI---STAKN-KIAQNRAEMQRFYQDVIDDHKRS 279
            |.....|:.:.   |.::::| :......:|:|   ...|: :.|:...:::.|..:.:.:|::|
  Rat   198 FLNLMDLLNKN---FQQVNSV-WCQMYNLWPTIIKYLPGKHIEFAKRIDDVKNFILEKVKEHQKS 258

  Fly   280 FDPNNIRDLVDFYLCEIEKAKAEGTDAELFDGKNHEEQLVQVIIDLFSAGMETIKTTLLWINVFM 344
            .||.|.||.:|.:|.:||:.| :...:|.     |.|.|.....:||:||.||..|||.:..:.:
  Rat   259 LDPANPRDYIDCFLSKIEEEK-DNLKSEF-----HLENLAVCGSNLFTAGTETTSTTLRFGLLLL 317

  Fly   345 LRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNG 409
            ::.|:...:|.:|||:|:|||:.|:::|...||.|::.:.|..|..:::|.:..|:..:|.:...
  Rat   318 MKYPEVQAKVHEELDRVIGRHQPPSMKDKMKLPYTDAVLHEIQRYITLLPSSLPHAVVQDTKFRD 382

  Fly   410 YTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVRKPEYFIPFGVGRRMCLGDVLARM 474
            |.||.|:.|:|:::||.:|...:..||:|.|..|:|..|..:|.:||:||.:|:|.|:|:.||||
  Rat   383 YVIPKGTTVLPMLSSVMLDQKEFANPEKFDPGHFLDKNGCFKKTDYFVPFSLGKRACVGESLARM 447

  Fly   475 ELFLFFASFMHCFDI-ALPEGQPLPSLKGNVGATITPESFKVCLKRR 520
            ||||||.:.:..|.: .|.|.:.|.......|....|..:|:||..|
  Rat   448 ELFLFFTTLLQKFSLKTLVEPKDLDIKPITTGIINLPPPYKLCLVPR 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp18a1NP_523403.2 p450 54..517 CDD:278495 154/471 (33%)
Cyp2c23NP_114027.2 p450 34..491 CDD:278495 154/471 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC78
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.